Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC11.61□□□□□ -0.55
Trim63Q38HM4 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim63Q38HM4 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Trim63Q38HM4 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
Trim63Q38HM4 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim63Q38HM4 Gm4081-201ENSMUST00000195287 1838 ntBASIC11.6□□□□□ -0.55
Trim63Q38HM4 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC11.6□□□□□ -0.55
Trim63Q38HM4 Gm44086-201ENSMUST00000203251 2349 ntBASIC11.6□□□□□ -0.55
Trim63Q38HM4 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim63Q38HM4 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trim63Q38HM4 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim63Q38HM4 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim63Q38HM4 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim63Q38HM4 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim63Q38HM4 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim63Q38HM4 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trim63Q38HM4 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Trim63Q38HM4 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim63Q38HM4 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim63Q38HM4 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC11.6□□□□□ -0.55
Trim63Q38HM4 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim63Q38HM4 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim63Q38HM4 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim63Q38HM4 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trim63Q38HM4 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC11.6□□□□□ -0.55
Trim63Q38HM4 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim63Q38HM4 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trim63Q38HM4 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC11.6□□□□□ -0.55
Trim63Q38HM4 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Trim63Q38HM4 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC11.6□□□□□ -0.55
Trim63Q38HM4 AC122769.4-201ENSMUST00000228166 901 ntBASIC11.6□□□□□ -0.55
Trim63Q38HM4 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trim63Q38HM4 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim63Q38HM4 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Trim63Q38HM4 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim63Q38HM4 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Trim63Q38HM4 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Trim63Q38HM4 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim63Q38HM4 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trim63Q38HM4 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim63Q38HM4 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim63Q38HM4 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim63Q38HM4 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim63Q38HM4 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC11.6□□□□□ -0.55
Trim63Q38HM4 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trim63Q38HM4 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC11.6□□□□□ -0.55
Trim63Q38HM4 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim63Q38HM4 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim63Q38HM4 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trim63Q38HM4 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim63Q38HM4 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trim63Q38HM4 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim63Q38HM4 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trim63Q38HM4 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim63Q38HM4 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Trim63Q38HM4 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim63Q38HM4 Gm6211-201ENSMUST00000147973 4275 ntBASIC11.59□□□□□ -0.55
Trim63Q38HM4 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim63Q38HM4 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim63Q38HM4 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Trim63Q38HM4 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC11.59□□□□□ -0.55
Trim63Q38HM4 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim63Q38HM4 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim63Q38HM4 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim63Q38HM4 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim63Q38HM4 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim63Q38HM4 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC11.59□□□□□ -0.55
Trim63Q38HM4 Gm11336-201ENSMUST00000118168 334 ntBASIC11.59□□□□□ -0.55
Trim63Q38HM4 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim63Q38HM4 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trim63Q38HM4 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim63Q38HM4 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim63Q38HM4 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Trim63Q38HM4 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trim63Q38HM4 Gm38027-201ENSMUST00000192315 235 ntBASIC11.59□□□□□ -0.55
Trim63Q38HM4 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim63Q38HM4 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Trim63Q38HM4 Gm10313-201ENSMUST00000095320 1002 ntBASIC11.59□□□□□ -0.55
Trim63Q38HM4 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trim63Q38HM4 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC11.59□□□□□ -0.55
Trim63Q38HM4 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC11.59□□□□□ -0.55
Trim63Q38HM4 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC11.59□□□□□ -0.55
Trim63Q38HM4 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim63Q38HM4 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim63Q38HM4 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim63Q38HM4 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim63Q38HM4 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Trim63Q38HM4 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim63Q38HM4 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim63Q38HM4 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim63Q38HM4 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Trim63Q38HM4 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim63Q38HM4 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC11.59□□□□□ -0.55
Trim63Q38HM4 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim63Q38HM4 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim63Q38HM4 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trim63Q38HM4 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC11.59□□□□□ -0.55
Trim63Q38HM4 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim63Q38HM4 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC11.59□□□□□ -0.55
Trim63Q38HM4 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms