Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Chd8Q09XV5 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Chd8Q09XV5 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Chd8Q09XV5 Gm5909-201ENSMUST00000119768 1281 ntBASIC12.49□□□□□ -0.41
Chd8Q09XV5 Gm13609-201ENSMUST00000141023 589 ntTSL 3 BASIC12.49□□□□□ -0.41
Chd8Q09XV5 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC12.49□□□□□ -0.41
Chd8Q09XV5 Gm26956-201ENSMUST00000182176 986 ntBASIC12.49□□□□□ -0.41
Chd8Q09XV5 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC12.49□□□□□ -0.41
Chd8Q09XV5 Gm6722-201ENSMUST00000221586 390 ntBASIC12.49□□□□□ -0.41
Chd8Q09XV5 AC154276.3-201ENSMUST00000227643 998 ntBASIC12.49□□□□□ -0.41
Chd8Q09XV5 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Chd8Q09XV5 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Chd8Q09XV5 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Chd8Q09XV5 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC12.49□□□□□ -0.41
Chd8Q09XV5 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Chd8Q09XV5 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Chd8Q09XV5 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC12.49□□□□□ -0.41
Chd8Q09XV5 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Chd8Q09XV5 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC12.48□□□□□ -0.41
Chd8Q09XV5 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Chd8Q09XV5 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Chd8Q09XV5 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Chd8Q09XV5 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Chd8Q09XV5 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Chd8Q09XV5 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC12.48□□□□□ -0.41
Chd8Q09XV5 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC12.48□□□□□ -0.41
Chd8Q09XV5 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC12.48□□□□□ -0.41
Chd8Q09XV5 Gm8385-201ENSMUST00000058999 643 ntBASIC12.48□□□□□ -0.41
Chd8Q09XV5 Gm10146-201ENSMUST00000072739 309 ntBASIC12.48□□□□□ -0.41
Chd8Q09XV5 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Chd8Q09XV5 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Chd8Q09XV5 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Chd8Q09XV5 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Chd8Q09XV5 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Chd8Q09XV5 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Chd8Q09XV5 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Chd8Q09XV5 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Chd8Q09XV5 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Chd8Q09XV5 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC12.48□□□□□ -0.41
Chd8Q09XV5 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Chd8Q09XV5 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
Chd8Q09XV5 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Chd8Q09XV5 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Chd8Q09XV5 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Chd8Q09XV5 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Chd8Q09XV5 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Chd8Q09XV5 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Chd8Q09XV5 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Chd8Q09XV5 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC12.48□□□□□ -0.41
Chd8Q09XV5 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Chd8Q09XV5 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Chd8Q09XV5 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Chd8Q09XV5 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Chd8Q09XV5 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Chd8Q09XV5 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Chd8Q09XV5 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Chd8Q09XV5 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Chd8Q09XV5 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Chd8Q09XV5 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Chd8Q09XV5 Gm25604-201ENSMUST00000158359 133 ntBASIC12.47□□□□□ -0.41
Chd8Q09XV5 Gm42929-201ENSMUST00000198374 1286 ntBASIC12.47□□□□□ -0.41
Chd8Q09XV5 AC132901.1-201ENSMUST00000224345 508 ntBASIC12.47□□□□□ -0.41
Chd8Q09XV5 Itm2b-204ENSMUST00000228637 783 ntBASIC12.47□□□□□ -0.41
Chd8Q09XV5 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Chd8Q09XV5 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Chd8Q09XV5 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Chd8Q09XV5 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC12.47□□□□□ -0.41
Chd8Q09XV5 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Chd8Q09XV5 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Chd8Q09XV5 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Chd8Q09XV5 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC12.47□□□□□ -0.41
Chd8Q09XV5 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Chd8Q09XV5 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Chd8Q09XV5 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Chd8Q09XV5 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Chd8Q09XV5 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Chd8Q09XV5 Mir671-201ENSMUST00000102432 98 ntBASIC12.47□□□□□ -0.41
Chd8Q09XV5 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Chd8Q09XV5 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Chd8Q09XV5 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC12.47□□□□□ -0.41
Chd8Q09XV5 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Chd8Q09XV5 Gm13316-201ENSMUST00000140537 691 ntBASIC12.47□□□□□ -0.41
Chd8Q09XV5 Gm24420-201ENSMUST00000176676 59 ntBASIC12.47□□□□□ -0.41
Chd8Q09XV5 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC12.47□□□□□ -0.41
Chd8Q09XV5 Gm31256-201ENSMUST00000194705 506 ntBASIC12.47□□□□□ -0.41
Chd8Q09XV5 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Chd8Q09XV5 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Chd8Q09XV5 Gm42918-201ENSMUST00000199249 1580 ntBASIC12.47□□□□□ -0.41
Chd8Q09XV5 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Chd8Q09XV5 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Chd8Q09XV5 Gm44729-201ENSMUST00000206759 2052 ntBASIC12.47□□□□□ -0.41
Chd8Q09XV5 Gm43352-201ENSMUST00000196419 3065 ntBASIC12.46□□□□□ -0.41
Chd8Q09XV5 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Chd8Q09XV5 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Chd8Q09XV5 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Chd8Q09XV5 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC12.46□□□□□ -0.41
Chd8Q09XV5 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Chd8Q09XV5 Gm27552-201ENSMUST00000183351 62 ntBASIC12.46□□□□□ -0.41
Chd8Q09XV5 Gm27844-201ENSMUST00000183613 62 ntBASIC12.46□□□□□ -0.41
Chd8Q09XV5 Gm19353-201ENSMUST00000184561 445 ntBASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms