Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Gm44335-201ENSMUST00000196879 141 ntBASIC11.75□□□□□ -0.53
Tff1Q08423 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Tff1Q08423 Gm44297-201ENSMUST00000198304 141 ntBASIC11.75□□□□□ -0.53
Tff1Q08423 Gm44346-201ENSMUST00000198851 141 ntBASIC11.75□□□□□ -0.53
Tff1Q08423 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tff1Q08423 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tff1Q08423 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Tff1Q08423 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Tff1Q08423 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tff1Q08423 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tff1Q08423 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Tff1Q08423 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Tff1Q08423 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tff1Q08423 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tff1Q08423 Gm37411-201ENSMUST00000194180 2282 ntBASIC11.75□□□□□ -0.53
Tff1Q08423 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Tff1Q08423 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Tff1Q08423 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tff1Q08423 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tff1Q08423 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Tff1Q08423 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Tff1Q08423 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Tff1Q08423 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tff1Q08423 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tff1Q08423 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tff1Q08423 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tff1Q08423 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tff1Q08423 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tff1Q08423 Gm45630-201ENSMUST00000210243 1911 ntBASIC11.74□□□□□ -0.53
Tff1Q08423 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC11.74□□□□□ -0.53
Tff1Q08423 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tff1Q08423 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tff1Q08423 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tff1Q08423 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Tff1Q08423 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Tff1Q08423 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Tff1Q08423 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tff1Q08423 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tff1Q08423 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tff1Q08423 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC11.74□□□□□ -0.53
Tff1Q08423 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC11.74□□□□□ -0.53
Tff1Q08423 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Tff1Q08423 Gm17968-201ENSMUST00000194902 784 ntBASIC11.74□□□□□ -0.53
Tff1Q08423 Olfr286-202ENSMUST00000205305 969 ntBASIC11.74□□□□□ -0.53
Tff1Q08423 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tff1Q08423 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Tff1Q08423 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC11.74□□□□□ -0.53
Tff1Q08423 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tff1Q08423 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tff1Q08423 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tff1Q08423 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tff1Q08423 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Tff1Q08423 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tff1Q08423 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Tff1Q08423 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tff1Q08423 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tff1Q08423 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tff1Q08423 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Tff1Q08423 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tff1Q08423 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tff1Q08423 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Tff1Q08423 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tff1Q08423 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tff1Q08423 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Tff1Q08423 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tff1Q08423 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tff1Q08423 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Tff1Q08423 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Tff1Q08423 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tff1Q08423 Gm9385-201ENSMUST00000117563 472 ntBASIC11.73□□□□□ -0.53
Tff1Q08423 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tff1Q08423 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Tff1Q08423 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC11.73□□□□□ -0.53
Tff1Q08423 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Tff1Q08423 Mir7023-201ENSMUST00000185093 64 ntBASIC11.73□□□□□ -0.53
Tff1Q08423 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC11.73□□□□□ -0.53
Tff1Q08423 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC11.73□□□□□ -0.53
Tff1Q08423 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC11.73□□□□□ -0.53
Tff1Q08423 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Tff1Q08423 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC11.73□□□□□ -0.53
Tff1Q08423 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Tff1Q08423 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tff1Q08423 Nrn1-204ENSMUST00000224323 1779 ntBASIC11.73□□□□□ -0.53
Tff1Q08423 AC131187.1-201ENSMUST00000224567 809 ntBASIC11.73□□□□□ -0.53
Tff1Q08423 Fgf17-202ENSMUST00000227123 1336 ntBASIC11.73□□□□□ -0.53
Tff1Q08423 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tff1Q08423 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tff1Q08423 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tff1Q08423 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tff1Q08423 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tff1Q08423 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tff1Q08423 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC11.73□□□□□ -0.53
Tff1Q08423 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Tff1Q08423 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tff1Q08423 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tff1Q08423 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tff1Q08423 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Tff1Q08423 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tff1Q08423 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tff1Q08423 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms