Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Scn1bP97952 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC12.9□□□□□ -0.34
Scn1bP97952 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Scn1bP97952 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Scn1bP97952 Gm9924-202ENSMUST00000192760 2311 ntBASIC12.9□□□□□ -0.34
Scn1bP97952 Gm15889-202ENSMUST00000212669 2443 ntBASIC12.9□□□□□ -0.34
Scn1bP97952 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Scn1bP97952 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Scn1bP97952 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Scn1bP97952 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Scn1bP97952 AC117194.1-201ENSMUST00000224847 3002 ntBASIC12.9□□□□□ -0.34
Scn1bP97952 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Scn1bP97952 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Scn1bP97952 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Scn1bP97952 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.9□□□□□ -0.34
Scn1bP97952 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Scn1bP97952 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Scn1bP97952 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Scn1bP97952 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC12.9□□□□□ -0.34
Scn1bP97952 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Scn1bP97952 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Scn1bP97952 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Scn1bP97952 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Scn1bP97952 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Scn1bP97952 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Scn1bP97952 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Scn1bP97952 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Scn1bP97952 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Scn1bP97952 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Scn1bP97952 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Scn1bP97952 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC12.9□□□□□ -0.34
Scn1bP97952 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Scn1bP97952 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Scn1bP97952 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Scn1bP97952 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.35
Scn1bP97952 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
Scn1bP97952 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Scn1bP97952 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Scn1bP97952 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Scn1bP97952 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Scn1bP97952 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Scn1bP97952 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Scn1bP97952 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Scn1bP97952 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Scn1bP97952 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Scn1bP97952 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.89□□□□□ -0.35
Scn1bP97952 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Scn1bP97952 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Scn1bP97952 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC12.89□□□□□ -0.35
Scn1bP97952 Gm14042-201ENSMUST00000120139 833 ntBASIC12.89□□□□□ -0.35
Scn1bP97952 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC12.89□□□□□ -0.35
Scn1bP97952 Gm8584-201ENSMUST00000171982 758 ntBASIC12.89□□□□□ -0.35
Scn1bP97952 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC12.89□□□□□ -0.35
Scn1bP97952 Ank2-226ENSMUST00000189368 339 ntBASIC12.89□□□□□ -0.35
Scn1bP97952 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Scn1bP97952 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC12.89□□□□□ -0.35
Scn1bP97952 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC12.89□□□□□ -0.35
Scn1bP97952 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.89□□□□□ -0.35
Scn1bP97952 Rbfox2-207ENSMUST00000227533 1041 ntBASIC12.89□□□□□ -0.35
Scn1bP97952 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Scn1bP97952 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Scn1bP97952 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Scn1bP97952 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Scn1bP97952 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Scn1bP97952 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Scn1bP97952 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Scn1bP97952 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Scn1bP97952 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.89□□□□□ -0.35
Scn1bP97952 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Scn1bP97952 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Scn1bP97952 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Scn1bP97952 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Scn1bP97952 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Scn1bP97952 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
Scn1bP97952 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC12.88□□□□□ -0.35
Scn1bP97952 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC12.88□□□□□ -0.35
Scn1bP97952 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Scn1bP97952 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Scn1bP97952 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Scn1bP97952 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Scn1bP97952 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Scn1bP97952 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Scn1bP97952 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Scn1bP97952 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Scn1bP97952 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Scn1bP97952 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Scn1bP97952 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Scn1bP97952 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Scn1bP97952 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Scn1bP97952 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Scn1bP97952 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Scn1bP97952 AC164567.1-201ENSMUST00000219185 960 ntBASIC12.88□□□□□ -0.35
Scn1bP97952 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Scn1bP97952 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Scn1bP97952 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Scn1bP97952 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Scn1bP97952 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Scn1bP97952 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Scn1bP97952 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Scn1bP97952 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms