Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC17.57■□□□□ 0.4
Smarcc1P97496 Gm22331-201ENSMUST00000158066 136 ntBASIC17.57■□□□□ 0.4
Smarcc1P97496 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Smarcc1P97496 Gm38223-201ENSMUST00000194484 695 ntBASIC17.57■□□□□ 0.4
Smarcc1P97496 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Smarcc1P97496 Gm6013-201ENSMUST00000212264 699 ntBASIC17.57■□□□□ 0.4
Smarcc1P97496 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Smarcc1P97496 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Smarcc1P97496 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smarcc1P97496 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smarcc1P97496 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Smarcc1P97496 Gm43598-201ENSMUST00000202482 2479 ntBASIC17.57■□□□□ 0.4
Smarcc1P97496 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smarcc1P97496 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smarcc1P97496 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smarcc1P97496 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Smarcc1P97496 Ankra2-208ENSMUST00000226100 1476 ntBASIC17.56■□□□□ 0.4
Smarcc1P97496 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smarcc1P97496 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smarcc1P97496 Gm9109-201ENSMUST00000120254 1405 ntBASIC17.56■□□□□ 0.4
Smarcc1P97496 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smarcc1P97496 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC17.56■□□□□ 0.4
Smarcc1P97496 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smarcc1P97496 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smarcc1P97496 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Smarcc1P97496 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Smarcc1P97496 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC17.56■□□□□ 0.4
Smarcc1P97496 Gm2639-201ENSMUST00000156881 1297 ntBASIC17.56■□□□□ 0.4
Smarcc1P97496 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smarcc1P97496 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Smarcc1P97496 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC17.56■□□□□ 0.4
Smarcc1P97496 Gm18054-201ENSMUST00000207539 555 ntBASIC17.56■□□□□ 0.4
Smarcc1P97496 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Smarcc1P97496 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smarcc1P97496 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smarcc1P97496 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smarcc1P97496 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smarcc1P97496 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smarcc1P97496 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smarcc1P97496 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Smarcc1P97496 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smarcc1P97496 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smarcc1P97496 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smarcc1P97496 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smarcc1P97496 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smarcc1P97496 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smarcc1P97496 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC17.55■□□□□ 0.4
Smarcc1P97496 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smarcc1P97496 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smarcc1P97496 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smarcc1P97496 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smarcc1P97496 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smarcc1P97496 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC17.55■□□□□ 0.4
Smarcc1P97496 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smarcc1P97496 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smarcc1P97496 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smarcc1P97496 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smarcc1P97496 Gm11803-201ENSMUST00000119966 444 ntBASIC17.55■□□□□ 0.4
Smarcc1P97496 Gm16177-201ENSMUST00000120728 718 ntBASIC17.55■□□□□ 0.4
Smarcc1P97496 Gm12329-201ENSMUST00000120829 1007 ntBASIC17.55■□□□□ 0.4
Smarcc1P97496 Gm14730-201ENSMUST00000122378 1045 ntBASIC17.55■□□□□ 0.4
Smarcc1P97496 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Smarcc1P97496 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smarcc1P97496 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC17.55■□□□□ 0.4
Smarcc1P97496 Gm9124-201ENSMUST00000191789 1092 ntBASIC17.55■□□□□ 0.4
Smarcc1P97496 Gm9113-201ENSMUST00000192510 1018 ntBASIC17.55■□□□□ 0.4
Smarcc1P97496 Gm9131-201ENSMUST00000193557 1089 ntBASIC17.55■□□□□ 0.4
Smarcc1P97496 Gm9121-201ENSMUST00000193749 1071 ntBASIC17.55■□□□□ 0.4
Smarcc1P97496 Gm7498-201ENSMUST00000203282 1084 ntBASIC17.55■□□□□ 0.4
Smarcc1P97496 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC17.55■□□□□ 0.4
Smarcc1P97496 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC17.55■□□□□ 0.4
Smarcc1P97496 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC17.55■□□□□ 0.4
Smarcc1P97496 CU024892.2-201ENSMUST00000224608 832 ntBASIC17.55■□□□□ 0.4
Smarcc1P97496 CT009713.10-202ENSMUST00000225734 696 ntBASIC17.55■□□□□ 0.4
Smarcc1P97496 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Smarcc1P97496 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Smarcc1P97496 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smarcc1P97496 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smarcc1P97496 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
Smarcc1P97496 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smarcc1P97496 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smarcc1P97496 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC17.54■□□□□ 0.4
Smarcc1P97496 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Smarcc1P97496 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC17.54■□□□□ 0.4
Smarcc1P97496 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC17.54■□□□□ 0.4
Smarcc1P97496 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smarcc1P97496 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smarcc1P97496 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smarcc1P97496 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smarcc1P97496 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smarcc1P97496 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smarcc1P97496 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smarcc1P97496 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smarcc1P97496 Gm8801-201ENSMUST00000173255 1064 ntBASIC17.54■□□□□ 0.4
Smarcc1P97496 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Smarcc1P97496 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Smarcc1P97496 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC17.54■□□□□ 0.4
Smarcc1P97496 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smarcc1P97496 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smarcc1P97496 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms