Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Npas1P97459 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Npas1P97459 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Npas1P97459 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Npas1P97459 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Npas1P97459 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Npas1P97459 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Npas1P97459 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Npas1P97459 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Npas1P97459 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Npas1P97459 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Npas1P97459 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Npas1P97459 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Npas1P97459 Gm13836-201ENSMUST00000121159 501 ntBASIC11.85□□□□□ -0.51
Npas1P97459 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC11.85□□□□□ -0.51
Npas1P97459 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC11.85□□□□□ -0.51
Npas1P97459 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Npas1P97459 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Npas1P97459 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC11.85□□□□□ -0.51
Npas1P97459 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Npas1P97459 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Npas1P97459 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Npas1P97459 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Npas1P97459 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Npas1P97459 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Npas1P97459 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Npas1P97459 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Npas1P97459 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Npas1P97459 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Npas1P97459 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Npas1P97459 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Npas1P97459 Gm20554-201ENSMUST00000177421 2352 ntBASIC11.85□□□□□ -0.51
Npas1P97459 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Npas1P97459 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Npas1P97459 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Npas1P97459 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Npas1P97459 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Npas1P97459 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC11.85□□□□□ -0.51
Npas1P97459 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Npas1P97459 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Npas1P97459 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Npas1P97459 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC11.85□□□□□ -0.51
Npas1P97459 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Npas1P97459 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Npas1P97459 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Npas1P97459 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Npas1P97459 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Npas1P97459 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Npas1P97459 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Npas1P97459 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Npas1P97459 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Npas1P97459 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Npas1P97459 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC11.84□□□□□ -0.51
Npas1P97459 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Npas1P97459 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
Npas1P97459 Gm18489-201ENSMUST00000172565 551 ntBASIC11.84□□□□□ -0.51
Npas1P97459 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Npas1P97459 Gm5253-201ENSMUST00000187104 1025 ntBASIC11.84□□□□□ -0.51
Npas1P97459 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC11.84□□□□□ -0.51
Npas1P97459 Gm9682-201ENSMUST00000197505 556 ntBASIC11.84□□□□□ -0.51
Npas1P97459 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC11.84□□□□□ -0.51
Npas1P97459 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Npas1P97459 AC147366.1-201ENSMUST00000227671 852 ntBASIC11.84□□□□□ -0.51
Npas1P97459 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Npas1P97459 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Npas1P97459 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Npas1P97459 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Npas1P97459 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Npas1P97459 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Npas1P97459 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Npas1P97459 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Npas1P97459 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Npas1P97459 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Npas1P97459 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC11.84□□□□□ -0.51
Npas1P97459 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC11.84□□□□□ -0.51
Npas1P97459 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Npas1P97459 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Npas1P97459 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Npas1P97459 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Npas1P97459 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Npas1P97459 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Npas1P97459 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Npas1P97459 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Npas1P97459 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Npas1P97459 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Npas1P97459 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC11.84□□□□□ -0.51
Npas1P97459 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Npas1P97459 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Npas1P97459 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC11.83□□□□□ -0.51
Npas1P97459 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Npas1P97459 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.51
Npas1P97459 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Npas1P97459 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Npas1P97459 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
Npas1P97459 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Npas1P97459 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Npas1P97459 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Npas1P97459 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Npas1P97459 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Npas1P97459 Gm7049-201ENSMUST00000223520 1712 ntBASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms