Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CiitaP79621 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CiitaP79621 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CiitaP79621 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CiitaP79621 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
CiitaP79621 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CiitaP79621 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CiitaP79621 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CiitaP79621 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CiitaP79621 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CiitaP79621 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC15.25■□□□□ 0.03
CiitaP79621 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
CiitaP79621 Gm5354-201ENSMUST00000182417 973 ntBASIC15.25■□□□□ 0.03
CiitaP79621 Ighv1-51-201ENSMUST00000192903 354 ntBASIC15.25■□□□□ 0.03
CiitaP79621 Gm37917-201ENSMUST00000194711 392 ntBASIC15.25■□□□□ 0.03
CiitaP79621 Gm17795-201ENSMUST00000214505 757 ntBASIC15.25■□□□□ 0.03
CiitaP79621 AC140375.2-201ENSMUST00000225283 584 ntBASIC15.25■□□□□ 0.03
CiitaP79621 AC154239.3-201ENSMUST00000226933 674 ntBASIC15.25■□□□□ 0.03
CiitaP79621 Gm6180-201ENSMUST00000065243 498 ntBASIC15.25■□□□□ 0.03
CiitaP79621 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CiitaP79621 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC15.25■□□□□ 0.03
CiitaP79621 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CiitaP79621 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CiitaP79621 Gm42471-201ENSMUST00000201457 1865 ntBASIC15.25■□□□□ 0.03
CiitaP79621 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CiitaP79621 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CiitaP79621 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CiitaP79621 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CiitaP79621 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
CiitaP79621 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CiitaP79621 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CiitaP79621 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CiitaP79621 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CiitaP79621 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
CiitaP79621 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC15.24■□□□□ 0.03
CiitaP79621 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC15.24■□□□□ 0.03
CiitaP79621 Gm13385-201ENSMUST00000121089 220 ntBASIC15.24■□□□□ 0.03
CiitaP79621 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC15.24■□□□□ 0.03
CiitaP79621 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CiitaP79621 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC15.24■□□□□ 0.03
CiitaP79621 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC15.24■□□□□ 0.03
CiitaP79621 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CiitaP79621 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC15.24■□□□□ 0.03
CiitaP79621 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CiitaP79621 Gm18624-201ENSMUST00000220966 658 ntBASIC15.24■□□□□ 0.03
CiitaP79621 Gm19220-201ENSMUST00000222682 803 ntBASIC15.24■□□□□ 0.03
CiitaP79621 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
CiitaP79621 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CiitaP79621 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CiitaP79621 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
CiitaP79621 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC15.24■□□□□ 0.03
CiitaP79621 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CiitaP79621 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CiitaP79621 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CiitaP79621 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CiitaP79621 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CiitaP79621 Gm38102-201ENSMUST00000192791 1935 ntBASIC15.23■□□□□ 0.03
CiitaP79621 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CiitaP79621 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC15.23■□□□□ 0.03
CiitaP79621 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CiitaP79621 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CiitaP79621 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CiitaP79621 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CiitaP79621 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC15.23■□□□□ 0.03
CiitaP79621 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CiitaP79621 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CiitaP79621 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CiitaP79621 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CiitaP79621 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CiitaP79621 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CiitaP79621 Gm11557-201ENSMUST00000120200 1008 ntBASIC15.23■□□□□ 0.03
CiitaP79621 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC15.23■□□□□ 0.03
CiitaP79621 Gm8927-201ENSMUST00000181978 981 ntBASIC15.23■□□□□ 0.03
CiitaP79621 Gm18018-201ENSMUST00000198273 408 ntBASIC15.23■□□□□ 0.03
CiitaP79621 Gm18905-201ENSMUST00000205454 928 ntBASIC15.23■□□□□ 0.03
CiitaP79621 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
CiitaP79621 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC15.23■□□□□ 0.03
CiitaP79621 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC15.23■□□□□ 0.03
CiitaP79621 Gm3222-201ENSMUST00000071282 990 ntBASIC15.23■□□□□ 0.03
CiitaP79621 Mir497b-201ENSMUST00000093601 125 ntBASIC15.23■□□□□ 0.03
CiitaP79621 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CiitaP79621 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
CiitaP79621 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CiitaP79621 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CiitaP79621 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CiitaP79621 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CiitaP79621 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CiitaP79621 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CiitaP79621 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CiitaP79621 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CiitaP79621 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CiitaP79621 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CiitaP79621 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CiitaP79621 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CiitaP79621 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CiitaP79621 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CiitaP79621 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CiitaP79621 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CiitaP79621 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CiitaP79621 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms