Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Gm5385-201ENSMUST00000118988 1559 ntBASIC13.95□□□□□ -0.18
Shox2P70390 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Shox2P70390 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Shox2P70390 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC13.95□□□□□ -0.18
Shox2P70390 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Shox2P70390 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Shox2P70390 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Shox2P70390 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Shox2P70390 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Shox2P70390 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Shox2P70390 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Shox2P70390 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Shox2P70390 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Shox2P70390 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Shox2P70390 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Shox2P70390 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Shox2P70390 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Shox2P70390 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Shox2P70390 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Shox2P70390 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Shox2P70390 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Shox2P70390 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Shox2P70390 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Shox2P70390 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Shox2P70390 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Shox2P70390 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC13.94□□□□□ -0.18
Shox2P70390 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Shox2P70390 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Shox2P70390 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC13.94□□□□□ -0.18
Shox2P70390 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Shox2P70390 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC13.94□□□□□ -0.18
Shox2P70390 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC13.94□□□□□ -0.18
Shox2P70390 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Shox2P70390 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC13.94□□□□□ -0.18
Shox2P70390 Gm7049-201ENSMUST00000223520 1712 ntBASIC13.94□□□□□ -0.18
Shox2P70390 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Shox2P70390 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Shox2P70390 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Shox2P70390 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Shox2P70390 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Shox2P70390 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC13.94□□□□□ -0.18
Shox2P70390 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Shox2P70390 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Shox2P70390 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Shox2P70390 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Shox2P70390 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Shox2P70390 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Shox2P70390 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Shox2P70390 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Shox2P70390 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Shox2P70390 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Shox2P70390 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Shox2P70390 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC13.93□□□□□ -0.18
Shox2P70390 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Shox2P70390 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Shox2P70390 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Shox2P70390 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Shox2P70390 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Shox2P70390 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC13.93□□□□□ -0.18
Shox2P70390 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Shox2P70390 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Shox2P70390 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC13.93□□□□□ -0.18
Shox2P70390 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Shox2P70390 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC13.93□□□□□ -0.18
Shox2P70390 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Shox2P70390 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Shox2P70390 AC153889.1-201ENSMUST00000219257 330 ntBASIC13.93□□□□□ -0.18
Shox2P70390 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Shox2P70390 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Shox2P70390 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Shox2P70390 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Shox2P70390 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Shox2P70390 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Shox2P70390 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC13.93□□□□□ -0.18
Shox2P70390 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Shox2P70390 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Shox2P70390 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Shox2P70390 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC13.93□□□□□ -0.18
Shox2P70390 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Shox2P70390 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Shox2P70390 Pck2-205ENSMUST00000226352 2784 ntBASIC13.93□□□□□ -0.18
Shox2P70390 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Shox2P70390 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Shox2P70390 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Shox2P70390 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13.92□□□□□ -0.18
Shox2P70390 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Shox2P70390 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Shox2P70390 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Shox2P70390 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Shox2P70390 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Shox2P70390 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Shox2P70390 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Shox2P70390 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
Shox2P70390 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Shox2P70390 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Shox2P70390 Gm18263-201ENSMUST00000220846 1928 ntBASIC13.92□□□□□ -0.18
Shox2P70390 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Shox2P70390 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Shox2P70390 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Shox2P70390 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms