Protein–RNA interactions for Protein: P63058

Thra, Thyroid hormone receptor alpha, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ThraP63058 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ThraP63058 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ThraP63058 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ThraP63058 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
ThraP63058 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
ThraP63058 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ThraP63058 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ThraP63058 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ThraP63058 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
ThraP63058 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC14.31□□□□□ -0.12
ThraP63058 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
ThraP63058 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
ThraP63058 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
ThraP63058 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ThraP63058 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ThraP63058 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ThraP63058 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ThraP63058 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ThraP63058 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC14.31□□□□□ -0.12
ThraP63058 Gm12151-201ENSMUST00000121374 290 ntBASIC14.31□□□□□ -0.12
ThraP63058 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
ThraP63058 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ThraP63058 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ThraP63058 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
ThraP63058 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
ThraP63058 Gm27306-201ENSMUST00000183970 107 ntBASIC14.31□□□□□ -0.12
ThraP63058 Gm17837-201ENSMUST00000186435 985 ntBASIC14.31□□□□□ -0.12
ThraP63058 Gm29541-201ENSMUST00000191351 678 ntBASIC14.31□□□□□ -0.12
ThraP63058 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ThraP63058 CT025535.1-201ENSMUST00000227172 491 ntBASIC14.31□□□□□ -0.12
ThraP63058 Rbfox2-208ENSMUST00000227930 1218 ntBASIC14.31□□□□□ -0.12
ThraP63058 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ThraP63058 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ThraP63058 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ThraP63058 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC14.31□□□□□ -0.12
ThraP63058 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ThraP63058 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
ThraP63058 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ThraP63058 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
ThraP63058 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
ThraP63058 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC14.31□□□□□ -0.12
ThraP63058 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC14.31□□□□□ -0.12
ThraP63058 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ThraP63058 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC14.31□□□□□ -0.12
ThraP63058 Gm38577-201ENSMUST00000221531 4545 ntBASIC14.31□□□□□ -0.12
ThraP63058 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ThraP63058 Ksr1-207ENSMUST00000226282 5260 ntBASIC14.3□□□□□ -0.12
ThraP63058 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ThraP63058 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC14.3□□□□□ -0.12
ThraP63058 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
ThraP63058 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ThraP63058 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ThraP63058 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ThraP63058 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ThraP63058 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC14.3□□□□□ -0.12
ThraP63058 Gm8410-201ENSMUST00000117225 605 ntBASIC14.3□□□□□ -0.12
ThraP63058 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ThraP63058 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC14.3□□□□□ -0.12
ThraP63058 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ThraP63058 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ThraP63058 Klk2-ps-201ENSMUST00000205342 571 ntBASIC14.3□□□□□ -0.12
ThraP63058 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
ThraP63058 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
ThraP63058 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
ThraP63058 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
ThraP63058 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
ThraP63058 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ThraP63058 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
ThraP63058 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC14.3□□□□□ -0.12
ThraP63058 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
ThraP63058 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
ThraP63058 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ThraP63058 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
ThraP63058 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ThraP63058 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ThraP63058 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
ThraP63058 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ThraP63058 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC14.29□□□□□ -0.12
ThraP63058 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ThraP63058 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ThraP63058 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC14.29□□□□□ -0.12
ThraP63058 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
ThraP63058 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
ThraP63058 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
ThraP63058 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
ThraP63058 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ThraP63058 Gm13453-201ENSMUST00000118708 357 ntBASIC14.29□□□□□ -0.12
ThraP63058 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ThraP63058 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC14.29□□□□□ -0.12
ThraP63058 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC14.29□□□□□ -0.12
ThraP63058 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC14.29□□□□□ -0.12
ThraP63058 Gm25144-201ENSMUST00000179561 110 ntBASIC14.29□□□□□ -0.12
ThraP63058 Gm25352-201ENSMUST00000179815 110 ntBASIC14.29□□□□□ -0.12
ThraP63058 Gm27437-201ENSMUST00000183429 107 ntBASIC14.29□□□□□ -0.12
ThraP63058 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC14.29□□□□□ -0.12
ThraP63058 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC14.29□□□□□ -0.12
ThraP63058 AC125206.2-201ENSMUST00000217454 574 ntBASIC14.29□□□□□ -0.12
ThraP63058 Gm5186-201ENSMUST00000218781 920 ntBASIC14.29□□□□□ -0.12
ThraP63058 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC14.29□□□□□ -0.12
ThraP63058 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms