Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC10.07□□□□□ -0.8
Rpl39P62892 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Rpl39P62892 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Rpl39P62892 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
Rpl39P62892 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Rpl39P62892 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Rpl39P62892 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC10.07□□□□□ -0.8
Rpl39P62892 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC10.07□□□□□ -0.8
Rpl39P62892 Gm8597-201ENSMUST00000191525 1109 ntBASIC10.07□□□□□ -0.8
Rpl39P62892 Gm43935-201ENSMUST00000203569 1050 ntBASIC10.07□□□□□ -0.8
Rpl39P62892 Gm45167-201ENSMUST00000208007 322 ntBASIC10.07□□□□□ -0.8
Rpl39P62892 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Rpl39P62892 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Rpl39P62892 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Rpl39P62892 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Rpl39P62892 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Rpl39P62892 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Rpl39P62892 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC10.07□□□□□ -0.8
Rpl39P62892 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Rpl39P62892 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Rpl39P62892 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Rpl39P62892 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Rpl39P62892 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Rpl39P62892 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Rpl39P62892 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Rpl39P62892 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Rpl39P62892 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Rpl39P62892 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Rpl39P62892 Gm37644-201ENSMUST00000192190 2270 ntBASIC10.07□□□□□ -0.8
Rpl39P62892 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Rpl39P62892 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Rpl39P62892 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Rpl39P62892 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Rpl39P62892 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Rpl39P62892 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Rpl39P62892 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC10.06□□□□□ -0.8
Rpl39P62892 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Rpl39P62892 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Rpl39P62892 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Rpl39P62892 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Rpl39P62892 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Rpl39P62892 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Rpl39P62892 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Rpl39P62892 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Rpl39P62892 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Rpl39P62892 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Rpl39P62892 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Rpl39P62892 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Rpl39P62892 Gm25990-201ENSMUST00000102440 86 ntBASIC10.06□□□□□ -0.8
Rpl39P62892 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Rpl39P62892 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Rpl39P62892 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Rpl39P62892 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Rpl39P62892 Gm7222-201ENSMUST00000117512 906 ntBASIC10.06□□□□□ -0.8
Rpl39P62892 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC10.06□□□□□ -0.8
Rpl39P62892 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC10.06□□□□□ -0.8
Rpl39P62892 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC10.06□□□□□ -0.8
Rpl39P62892 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Rpl39P62892 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Rpl39P62892 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Rpl39P62892 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC10.06□□□□□ -0.8
Rpl39P62892 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Rpl39P62892 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Rpl39P62892 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Rpl39P62892 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC10.06□□□□□ -0.8
Rpl39P62892 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Rpl39P62892 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Rpl39P62892 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC10.06□□□□□ -0.8
Rpl39P62892 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Rpl39P62892 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Rpl39P62892 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Rpl39P62892 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC10.06□□□□□ -0.8
Rpl39P62892 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Rpl39P62892 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Rpl39P62892 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Rpl39P62892 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Rpl39P62892 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Rpl39P62892 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC10.05□□□□□ -0.8
Rpl39P62892 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Rpl39P62892 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Rpl39P62892 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Rpl39P62892 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Rpl39P62892 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Rpl39P62892 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Rpl39P62892 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Rpl39P62892 Gm6944-201ENSMUST00000182449 1006 ntBASIC10.05□□□□□ -0.8
Rpl39P62892 Gm33142-201ENSMUST00000193913 867 ntBASIC10.05□□□□□ -0.8
Rpl39P62892 AC102291.3-201ENSMUST00000226566 405 ntBASIC10.05□□□□□ -0.8
Rpl39P62892 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Rpl39P62892 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Rpl39P62892 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Rpl39P62892 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Rpl39P62892 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC10.05□□□□□ -0.8
Rpl39P62892 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Rpl39P62892 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC10.05□□□□□ -0.8
Rpl39P62892 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC10.05□□□□□ -0.8
Rpl39P62892 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Rpl39P62892 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Rpl39P62892 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Rpl39P62892 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms