Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lsm6P62313 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lsm6P62313 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC12.4□□□□□ -0.42
Lsm6P62313 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Lsm6P62313 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Lsm6P62313 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lsm6P62313 Gm9719-201ENSMUST00000162765 543 ntBASIC12.4□□□□□ -0.42
Lsm6P62313 AA543401-201ENSMUST00000164248 1269 ntBASIC12.4□□□□□ -0.42
Lsm6P62313 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Lsm6P62313 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Lsm6P62313 Gm18766-201ENSMUST00000189811 808 ntBASIC12.4□□□□□ -0.42
Lsm6P62313 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lsm6P62313 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lsm6P62313 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Lsm6P62313 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lsm6P62313 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lsm6P62313 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lsm6P62313 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lsm6P62313 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lsm6P62313 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Lsm6P62313 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lsm6P62313 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lsm6P62313 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lsm6P62313 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lsm6P62313 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lsm6P62313 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC12.4□□□□□ -0.43
Lsm6P62313 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.43
Lsm6P62313 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Lsm6P62313 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.43
Lsm6P62313 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm6P62313 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm6P62313 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm6P62313 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm6P62313 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC12.39□□□□□ -0.43
Lsm6P62313 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm6P62313 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Lsm6P62313 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm6P62313 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
Lsm6P62313 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm6P62313 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm6P62313 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm6P62313 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm6P62313 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Lsm6P62313 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC12.39□□□□□ -0.43
Lsm6P62313 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Lsm6P62313 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm6P62313 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm6P62313 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC12.39□□□□□ -0.43
Lsm6P62313 Gm29541-201ENSMUST00000191351 678 ntBASIC12.39□□□□□ -0.43
Lsm6P62313 Gm10253-201ENSMUST00000194270 940 ntBASIC12.39□□□□□ -0.43
Lsm6P62313 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC12.39□□□□□ -0.43
Lsm6P62313 Gm43073-201ENSMUST00000198200 1189 ntBASIC12.39□□□□□ -0.43
Lsm6P62313 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm6P62313 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC12.39□□□□□ -0.43
Lsm6P62313 AC140397.2-201ENSMUST00000224213 834 ntBASIC12.39□□□□□ -0.43
Lsm6P62313 AC139350.3-201ENSMUST00000226151 420 ntBASIC12.39□□□□□ -0.43
Lsm6P62313 AC149588.3-201ENSMUST00000227515 150 ntBASIC12.39□□□□□ -0.43
Lsm6P62313 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm6P62313 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Lsm6P62313 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
Lsm6P62313 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm6P62313 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm6P62313 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC12.39□□□□□ -0.43
Lsm6P62313 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Lsm6P62313 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm6P62313 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Lsm6P62313 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm6P62313 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Lsm6P62313 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm6P62313 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm6P62313 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm6P62313 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm6P62313 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm6P62313 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm6P62313 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm6P62313 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm6P62313 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm6P62313 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Lsm6P62313 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lsm6P62313 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lsm6P62313 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Lsm6P62313 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lsm6P62313 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Lsm6P62313 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC12.38□□□□□ -0.43
Lsm6P62313 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lsm6P62313 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Lsm6P62313 Gm6736-201ENSMUST00000166583 948 ntBASIC12.38□□□□□ -0.43
Lsm6P62313 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC12.38□□□□□ -0.43
Lsm6P62313 Gm5312-201ENSMUST00000203728 547 ntBASIC12.38□□□□□ -0.43
Lsm6P62313 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Lsm6P62313 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lsm6P62313 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Lsm6P62313 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC12.38□□□□□ -0.43
Lsm6P62313 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lsm6P62313 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Lsm6P62313 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lsm6P62313 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lsm6P62313 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lsm6P62313 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Lsm6P62313 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms