Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lsm3P62311 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC12.84□□□□□ -0.35
Lsm3P62311 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC12.84□□□□□ -0.35
Lsm3P62311 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC12.84□□□□□ -0.35
Lsm3P62311 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lsm3P62311 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Lsm3P62311 Gm8668-201ENSMUST00000120559 1447 ntBASIC12.84□□□□□ -0.35
Lsm3P62311 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC12.84□□□□□ -0.35
Lsm3P62311 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Lsm3P62311 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lsm3P62311 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Lsm3P62311 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lsm3P62311 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Lsm3P62311 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
Lsm3P62311 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Lsm3P62311 Gm37133-201ENSMUST00000192705 1922 ntBASIC12.84□□□□□ -0.35
Lsm3P62311 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lsm3P62311 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Lsm3P62311 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Lsm3P62311 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Lsm3P62311 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Lsm3P62311 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Lsm3P62311 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
Lsm3P62311 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Lsm3P62311 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC12.83□□□□□ -0.35
Lsm3P62311 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Lsm3P62311 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Lsm3P62311 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lsm3P62311 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Lsm3P62311 Gm5837-201ENSMUST00000191844 1369 ntBASIC12.83□□□□□ -0.36
Lsm3P62311 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Lsm3P62311 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lsm3P62311 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lsm3P62311 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lsm3P62311 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lsm3P62311 Gm6159-201ENSMUST00000191249 1724 ntBASIC12.83□□□□□ -0.36
Lsm3P62311 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lsm3P62311 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
Lsm3P62311 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lsm3P62311 Gm8749-201ENSMUST00000117737 331 ntBASIC12.83□□□□□ -0.36
Lsm3P62311 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC12.83□□□□□ -0.36
Lsm3P62311 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lsm3P62311 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Lsm3P62311 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Lsm3P62311 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
Lsm3P62311 CT010506.4-201ENSMUST00000225457 351 ntBASIC12.83□□□□□ -0.36
Lsm3P62311 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lsm3P62311 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lsm3P62311 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC12.83□□□□□ -0.36
Lsm3P62311 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lsm3P62311 Tcf21-202ENSMUST00000218002 1788 ntBASIC12.83□□□□□ -0.36
Lsm3P62311 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC12.83□□□□□ -0.36
Lsm3P62311 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lsm3P62311 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Lsm3P62311 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Lsm3P62311 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Lsm3P62311 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Lsm3P62311 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.36
Lsm3P62311 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lsm3P62311 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lsm3P62311 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Lsm3P62311 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lsm3P62311 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lsm3P62311 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Lsm3P62311 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Lsm3P62311 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Lsm3P62311 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Lsm3P62311 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lsm3P62311 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Lsm3P62311 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lsm3P62311 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lsm3P62311 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lsm3P62311 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lsm3P62311 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lsm3P62311 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lsm3P62311 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Lsm3P62311 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC12.82□□□□□ -0.36
Lsm3P62311 Gm18032-201ENSMUST00000222541 538 ntBASIC12.82□□□□□ -0.36
Lsm3P62311 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC12.82□□□□□ -0.36
Lsm3P62311 AC154595.3-201ENSMUST00000224579 384 ntBASIC12.82□□□□□ -0.36
Lsm3P62311 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lsm3P62311 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Lsm3P62311 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lsm3P62311 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Lsm3P62311 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lsm3P62311 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lsm3P62311 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12.82□□□□□ -0.36
Lsm3P62311 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lsm3P62311 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC12.82□□□□□ -0.36
Lsm3P62311 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lsm3P62311 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lsm3P62311 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lsm3P62311 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Lsm3P62311 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Lsm3P62311 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Lsm3P62311 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lsm3P62311 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lsm3P62311 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lsm3P62311 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
Lsm3P62311 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms