Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Sf3b6P59708 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sf3b6P59708 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC12.53□□□□□ -0.4
Sf3b6P59708 Gm45098-201ENSMUST00000207179 657 ntBASIC12.53□□□□□ -0.4
Sf3b6P59708 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sf3b6P59708 Gm15823-201ENSMUST00000064305 670 ntBASIC12.53□□□□□ -0.4
Sf3b6P59708 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sf3b6P59708 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Sf3b6P59708 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sf3b6P59708 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sf3b6P59708 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sf3b6P59708 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
Sf3b6P59708 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sf3b6P59708 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sf3b6P59708 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sf3b6P59708 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC12.53□□□□□ -0.4
Sf3b6P59708 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sf3b6P59708 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.4
Sf3b6P59708 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sf3b6P59708 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sf3b6P59708 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Sf3b6P59708 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sf3b6P59708 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Sf3b6P59708 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sf3b6P59708 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sf3b6P59708 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Sf3b6P59708 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC12.52□□□□□ -0.41
Sf3b6P59708 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sf3b6P59708 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Sf3b6P59708 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC12.52□□□□□ -0.41
Sf3b6P59708 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC12.52□□□□□ -0.41
Sf3b6P59708 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC12.52□□□□□ -0.41
Sf3b6P59708 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC12.52□□□□□ -0.41
Sf3b6P59708 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC12.52□□□□□ -0.41
Sf3b6P59708 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC12.52□□□□□ -0.41
Sf3b6P59708 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC12.52□□□□□ -0.41
Sf3b6P59708 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sf3b6P59708 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sf3b6P59708 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sf3b6P59708 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sf3b6P59708 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Sf3b6P59708 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC12.52□□□□□ -0.41
Sf3b6P59708 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sf3b6P59708 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sf3b6P59708 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Sf3b6P59708 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sf3b6P59708 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Sf3b6P59708 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC12.52□□□□□ -0.41
Sf3b6P59708 Gm9109-201ENSMUST00000120254 1405 ntBASIC12.52□□□□□ -0.41
Sf3b6P59708 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sf3b6P59708 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sf3b6P59708 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Sf3b6P59708 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC12.51□□□□□ -0.41
Sf3b6P59708 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sf3b6P59708 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sf3b6P59708 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sf3b6P59708 Gm9924-202ENSMUST00000192760 2311 ntBASIC12.51□□□□□ -0.41
Sf3b6P59708 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sf3b6P59708 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Sf3b6P59708 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sf3b6P59708 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sf3b6P59708 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Sf3b6P59708 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sf3b6P59708 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sf3b6P59708 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sf3b6P59708 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sf3b6P59708 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sf3b6P59708 Gm27628-201ENSMUST00000184911 107 ntBASIC12.51□□□□□ -0.41
Sf3b6P59708 Gm42670-201ENSMUST00000201816 1292 ntBASIC12.51□□□□□ -0.41
Sf3b6P59708 Gm5364-201ENSMUST00000216789 889 ntBASIC12.51□□□□□ -0.41
Sf3b6P59708 Psmb5-202ENSMUST00000227257 622 ntBASIC12.51□□□□□ -0.41
Sf3b6P59708 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sf3b6P59708 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sf3b6P59708 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sf3b6P59708 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC12.51□□□□□ -0.41
Sf3b6P59708 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Sf3b6P59708 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.51□□□□□ -0.41
Sf3b6P59708 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sf3b6P59708 Gm37844-201ENSMUST00000192473 4097 ntBASIC12.51□□□□□ -0.41
Sf3b6P59708 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sf3b6P59708 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sf3b6P59708 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sf3b6P59708 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sf3b6P59708 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sf3b6P59708 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC12.51□□□□□ -0.41
Sf3b6P59708 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sf3b6P59708 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sf3b6P59708 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Sf3b6P59708 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Sf3b6P59708 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sf3b6P59708 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sf3b6P59708 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sf3b6P59708 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sf3b6P59708 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Sf3b6P59708 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC12.5□□□□□ -0.41
Sf3b6P59708 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC12.5□□□□□ -0.41
Sf3b6P59708 Gm5479-201ENSMUST00000160578 435 ntBASIC12.5□□□□□ -0.41
Sf3b6P59708 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Sf3b6P59708 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC12.5□□□□□ -0.41
Sf3b6P59708 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms