Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdh11P55288 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdh11P55288 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdh11P55288 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Cdh11P55288 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdh11P55288 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC12.87□□□□□ -0.35
Cdh11P55288 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdh11P55288 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cdh11P55288 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC12.87□□□□□ -0.35
Cdh11P55288 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdh11P55288 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Cdh11P55288 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC12.87□□□□□ -0.35
Cdh11P55288 Gm9385-201ENSMUST00000117563 472 ntBASIC12.87□□□□□ -0.35
Cdh11P55288 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdh11P55288 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cdh11P55288 Rpph1-201ENSMUST00000175096 319 ntBASIC12.87□□□□□ -0.35
Cdh11P55288 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC12.87□□□□□ -0.35
Cdh11P55288 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC12.87□□□□□ -0.35
Cdh11P55288 Gm37171-201ENSMUST00000192636 1185 ntBASIC12.87□□□□□ -0.35
Cdh11P55288 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC12.87□□□□□ -0.35
Cdh11P55288 CT010506.4-201ENSMUST00000225457 351 ntBASIC12.87□□□□□ -0.35
Cdh11P55288 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Cdh11P55288 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Cdh11P55288 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdh11P55288 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cdh11P55288 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdh11P55288 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
Cdh11P55288 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdh11P55288 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdh11P55288 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Cdh11P55288 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdh11P55288 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdh11P55288 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdh11P55288 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Cdh11P55288 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdh11P55288 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdh11P55288 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdh11P55288 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC12.86□□□□□ -0.35
Cdh11P55288 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cdh11P55288 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC12.86□□□□□ -0.35
Cdh11P55288 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdh11P55288 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdh11P55288 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdh11P55288 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdh11P55288 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdh11P55288 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Cdh11P55288 Gm15920-201ENSMUST00000118998 402 ntBASIC12.86□□□□□ -0.35
Cdh11P55288 Gm18889-201ENSMUST00000174284 929 ntBASIC12.86□□□□□ -0.35
Cdh11P55288 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Cdh11P55288 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdh11P55288 Gm5312-201ENSMUST00000203728 547 ntBASIC12.86□□□□□ -0.35
Cdh11P55288 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC12.86□□□□□ -0.35
Cdh11P55288 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdh11P55288 Gm5628-201ENSMUST00000222318 1049 ntBASIC12.86□□□□□ -0.35
Cdh11P55288 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Cdh11P55288 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdh11P55288 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdh11P55288 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdh11P55288 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Cdh11P55288 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC12.86□□□□□ -0.35
Cdh11P55288 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdh11P55288 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdh11P55288 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Cdh11P55288 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdh11P55288 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdh11P55288 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Cdh11P55288 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Cdh11P55288 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdh11P55288 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdh11P55288 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdh11P55288 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cdh11P55288 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdh11P55288 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdh11P55288 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdh11P55288 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cdh11P55288 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdh11P55288 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdh11P55288 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC12.85□□□□□ -0.35
Cdh11P55288 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdh11P55288 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
Cdh11P55288 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdh11P55288 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC12.85□□□□□ -0.35
Cdh11P55288 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cdh11P55288 Mir6990-201ENSMUST00000183724 91 ntBASIC12.85□□□□□ -0.35
Cdh11P55288 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC12.85□□□□□ -0.35
Cdh11P55288 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC12.85□□□□□ -0.35
Cdh11P55288 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC12.85□□□□□ -0.35
Cdh11P55288 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdh11P55288 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cdh11P55288 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdh11P55288 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC12.85□□□□□ -0.35
Cdh11P55288 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdh11P55288 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
Cdh11P55288 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC12.85□□□□□ -0.35
Cdh11P55288 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cdh11P55288 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdh11P55288 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Cdh11P55288 Mmp14-206ENSMUST00000225641 3238 ntBASIC12.84□□□□□ -0.35
Cdh11P55288 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdh11P55288 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms