Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Fdft1P53798 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Fdft1P53798 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Fdft1P53798 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Fdft1P53798 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Fdft1P53798 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Fdft1P53798 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Fdft1P53798 Gm42872-201ENSMUST00000200026 1967 ntBASIC14.11□□□□□ -0.15
Fdft1P53798 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC14.1□□□□□ -0.15
Fdft1P53798 Gm13332-201ENSMUST00000120451 1398 ntBASIC14.1□□□□□ -0.15
Fdft1P53798 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Fdft1P53798 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Fdft1P53798 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Fdft1P53798 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Fdft1P53798 Gm5648-201ENSMUST00000122244 1587 ntBASIC14.1□□□□□ -0.15
Fdft1P53798 Nudt18-203ENSMUST00000228768 1578 ntBASIC14.1□□□□□ -0.15
Fdft1P53798 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Fdft1P53798 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC14.1□□□□□ -0.15
Fdft1P53798 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Fdft1P53798 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Fdft1P53798 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Fdft1P53798 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC14.1□□□□□ -0.15
Fdft1P53798 Gm13365-201ENSMUST00000121188 973 ntBASIC14.1□□□□□ -0.15
Fdft1P53798 Mir1895-201ENSMUST00000122615 79 ntBASIC14.1□□□□□ -0.15
Fdft1P53798 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Fdft1P53798 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC14.1□□□□□ -0.15
Fdft1P53798 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Fdft1P53798 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC14.1□□□□□ -0.15
Fdft1P53798 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC14.1□□□□□ -0.15
Fdft1P53798 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Fdft1P53798 Gm38225-201ENSMUST00000194001 393 ntBASIC14.1□□□□□ -0.15
Fdft1P53798 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC14.1□□□□□ -0.15
Fdft1P53798 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC14.1□□□□□ -0.15
Fdft1P53798 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
Fdft1P53798 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Fdft1P53798 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Fdft1P53798 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Fdft1P53798 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Fdft1P53798 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Fdft1P53798 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Fdft1P53798 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC14.1□□□□□ -0.15
Fdft1P53798 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Fdft1P53798 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Fdft1P53798 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Fdft1P53798 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC14.1□□□□□ -0.15
Fdft1P53798 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Fdft1P53798 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Fdft1P53798 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Fdft1P53798 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Fdft1P53798 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Fdft1P53798 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Fdft1P53798 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Fdft1P53798 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Fdft1P53798 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Fdft1P53798 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Fdft1P53798 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Fdft1P53798 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Fdft1P53798 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Fdft1P53798 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Fdft1P53798 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Fdft1P53798 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Fdft1P53798 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Fdft1P53798 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Fdft1P53798 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Fdft1P53798 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Fdft1P53798 Gm10275-202ENSMUST00000168697 495 ntBASIC14.09□□□□□ -0.15
Fdft1P53798 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC14.09□□□□□ -0.15
Fdft1P53798 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Fdft1P53798 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Fdft1P53798 Gm10275-201ENSMUST00000092620 635 ntBASIC14.09□□□□□ -0.15
Fdft1P53798 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Fdft1P53798 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Fdft1P53798 Gm37411-201ENSMUST00000194180 2282 ntBASIC14.09□□□□□ -0.15
Fdft1P53798 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Fdft1P53798 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Fdft1P53798 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Fdft1P53798 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Fdft1P53798 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Fdft1P53798 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Fdft1P53798 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Fdft1P53798 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Fdft1P53798 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Fdft1P53798 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Fdft1P53798 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Fdft1P53798 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
Fdft1P53798 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Fdft1P53798 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Fdft1P53798 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Fdft1P53798 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Fdft1P53798 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC14.08□□□□□ -0.15
Fdft1P53798 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Fdft1P53798 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Fdft1P53798 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Fdft1P53798 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Fdft1P53798 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Fdft1P53798 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Fdft1P53798 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Fdft1P53798 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Fdft1P53798 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
Fdft1P53798 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms