Protein–RNA interactions for Protein: P51448

Rora, Nuclear receptor ROR-alpha, mousemouse

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RoraP51448 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RoraP51448 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC13.35□□□□□ -0.27
RoraP51448 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
RoraP51448 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RoraP51448 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
RoraP51448 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RoraP51448 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RoraP51448 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RoraP51448 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
RoraP51448 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC13.35□□□□□ -0.27
RoraP51448 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RoraP51448 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC13.35□□□□□ -0.27
RoraP51448 Gm21854-201ENSMUST00000179901 471 ntBASIC13.35□□□□□ -0.27
RoraP51448 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
RoraP51448 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RoraP51448 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
RoraP51448 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC13.35□□□□□ -0.27
RoraP51448 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RoraP51448 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC13.35□□□□□ -0.27
RoraP51448 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RoraP51448 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RoraP51448 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
RoraP51448 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RoraP51448 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
RoraP51448 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
RoraP51448 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RoraP51448 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
RoraP51448 Gm45667-201ENSMUST00000210380 1316 ntBASIC13.35□□□□□ -0.27
RoraP51448 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC13.35□□□□□ -0.27
RoraP51448 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RoraP51448 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC13.35□□□□□ -0.27
RoraP51448 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RoraP51448 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RoraP51448 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RoraP51448 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RoraP51448 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RoraP51448 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RoraP51448 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RoraP51448 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
RoraP51448 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
RoraP51448 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RoraP51448 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RoraP51448 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RoraP51448 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
RoraP51448 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RoraP51448 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
RoraP51448 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RoraP51448 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RoraP51448 Gm10605-202ENSMUST00000183019 3198 ntBASIC13.34□□□□□ -0.27
RoraP51448 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
RoraP51448 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC13.34□□□□□ -0.27
RoraP51448 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC13.34□□□□□ -0.27
RoraP51448 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC13.34□□□□□ -0.27
RoraP51448 Gm33320-201ENSMUST00000192232 530 ntBASIC13.34□□□□□ -0.27
RoraP51448 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC13.34□□□□□ -0.27
RoraP51448 Gm42612-201ENSMUST00000197986 623 ntBASIC13.34□□□□□ -0.27
RoraP51448 Gm43170-201ENSMUST00000199827 612 ntBASIC13.34□□□□□ -0.27
RoraP51448 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
RoraP51448 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
RoraP51448 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
RoraP51448 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RoraP51448 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
RoraP51448 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
RoraP51448 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RoraP51448 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RoraP51448 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
RoraP51448 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
RoraP51448 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
RoraP51448 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RoraP51448 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RoraP51448 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RoraP51448 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RoraP51448 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
RoraP51448 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
RoraP51448 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RoraP51448 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RoraP51448 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RoraP51448 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
RoraP51448 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
RoraP51448 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC13.33□□□□□ -0.28
RoraP51448 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RoraP51448 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
RoraP51448 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
RoraP51448 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
RoraP51448 Gm12585-201ENSMUST00000117307 290 ntBASIC13.33□□□□□ -0.28
RoraP51448 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC13.33□□□□□ -0.28
RoraP51448 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
RoraP51448 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RoraP51448 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC13.33□□□□□ -0.28
RoraP51448 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RoraP51448 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RoraP51448 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
RoraP51448 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
RoraP51448 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RoraP51448 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
RoraP51448 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RoraP51448 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RoraP51448 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
RoraP51448 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC13.33□□□□□ -0.28
RoraP51448 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms