Protein–RNA interactions for Protein: P48759

Ptx3, Pentraxin-related protein PTX3, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptx3P48759 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ptx3P48759 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC13.13□□□□□ -0.31
Ptx3P48759 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Ptx3P48759 AC135669.1-201ENSMUST00000213585 412 ntBASIC13.13□□□□□ -0.31
Ptx3P48759 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ptx3P48759 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ptx3P48759 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Ptx3P48759 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC13.13□□□□□ -0.31
Ptx3P48759 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ptx3P48759 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ptx3P48759 Camk2g-217ENSMUST00000226630 1937 ntBASIC13.13□□□□□ -0.31
Ptx3P48759 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ptx3P48759 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ptx3P48759 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Ptx3P48759 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ptx3P48759 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ptx3P48759 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Ptx3P48759 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ptx3P48759 Gm14451-201ENSMUST00000121581 1542 ntBASIC13.13□□□□□ -0.31
Ptx3P48759 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Ptx3P48759 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ptx3P48759 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC13.12□□□□□ -0.31
Ptx3P48759 Ntrk2-208ENSMUST00000225583 2719 ntBASIC13.12□□□□□ -0.31
Ptx3P48759 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ptx3P48759 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ptx3P48759 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ptx3P48759 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ptx3P48759 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ptx3P48759 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ptx3P48759 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ptx3P48759 Gm15460-201ENSMUST00000118147 391 ntBASIC13.12□□□□□ -0.31
Ptx3P48759 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
Ptx3P48759 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ptx3P48759 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Ptx3P48759 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
Ptx3P48759 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ptx3P48759 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC13.12□□□□□ -0.31
Ptx3P48759 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ptx3P48759 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ptx3P48759 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ptx3P48759 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Ptx3P48759 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ptx3P48759 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC13.12□□□□□ -0.31
Ptx3P48759 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ptx3P48759 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ptx3P48759 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ptx3P48759 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC13.12□□□□□ -0.31
Ptx3P48759 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ptx3P48759 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Ptx3P48759 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ptx3P48759 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ptx3P48759 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ptx3P48759 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Ptx3P48759 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ptx3P48759 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ptx3P48759 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ptx3P48759 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ptx3P48759 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ptx3P48759 AC164107.1-201ENSMUST00000227730 2161 ntBASIC13.11□□□□□ -0.31
Ptx3P48759 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ptx3P48759 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ptx3P48759 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ptx3P48759 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ptx3P48759 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ptx3P48759 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ptx3P48759 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC13.11□□□□□ -0.31
Ptx3P48759 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ptx3P48759 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
Ptx3P48759 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC13.11□□□□□ -0.31
Ptx3P48759 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ptx3P48759 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ptx3P48759 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC13.11□□□□□ -0.31
Ptx3P48759 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC13.11□□□□□ -0.31
Ptx3P48759 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ptx3P48759 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC13.11□□□□□ -0.31
Ptx3P48759 Hist1h2al-201ENSMUST00000091708 339 ntBASIC13.11□□□□□ -0.31
Ptx3P48759 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ptx3P48759 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ptx3P48759 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC13.11□□□□□ -0.31
Ptx3P48759 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Ptx3P48759 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
Ptx3P48759 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ptx3P48759 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC13.11□□□□□ -0.31
Ptx3P48759 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ptx3P48759 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Ptx3P48759 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ptx3P48759 Gm6263-201ENSMUST00000120029 1342 ntBASIC13.11□□□□□ -0.31
Ptx3P48759 Gm45667-201ENSMUST00000210380 1316 ntBASIC13.11□□□□□ -0.31
Ptx3P48759 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ptx3P48759 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ptx3P48759 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ptx3P48759 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ptx3P48759 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ptx3P48759 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ptx3P48759 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ptx3P48759 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ptx3P48759 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ptx3P48759 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ptx3P48759 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ptx3P48759 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms