Protein–RNA interactions for Protein: P47806

Gli1, Zinc finger protein GLI1, mousemouse

Predictions only

Length 1,111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli1P47806 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Gli1P47806 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Gli1P47806 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Gli1P47806 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Gli1P47806 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC13.79□□□□□ -0.2
Gli1P47806 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC13.79□□□□□ -0.2
Gli1P47806 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC13.79□□□□□ -0.2
Gli1P47806 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC13.79□□□□□ -0.2
Gli1P47806 Gm22175-201ENSMUST00000175007 78 ntBASIC13.79□□□□□ -0.2
Gli1P47806 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC13.79□□□□□ -0.2
Gli1P47806 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Gli1P47806 Gm43125-201ENSMUST00000201724 730 ntBASIC13.79□□□□□ -0.2
Gli1P47806 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC13.79□□□□□ -0.2
Gli1P47806 Gpr146-202ENSMUST00000053120 1040 ntBASIC13.79□□□□□ -0.2
Gli1P47806 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Gli1P47806 Gm45630-201ENSMUST00000210243 1911 ntBASIC13.79□□□□□ -0.2
Gli1P47806 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Gli1P47806 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC13.79□□□□□ -0.2
Gli1P47806 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Gli1P47806 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Gli1P47806 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Gli1P47806 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Gli1P47806 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Gli1P47806 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Gli1P47806 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Gli1P47806 Gm37411-201ENSMUST00000194180 2282 ntBASIC13.79□□□□□ -0.2
Gli1P47806 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Gli1P47806 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Gli1P47806 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gli1P47806 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Gli1P47806 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gli1P47806 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gli1P47806 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gli1P47806 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Gli1P47806 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Gli1P47806 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gli1P47806 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
Gli1P47806 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gli1P47806 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gli1P47806 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gli1P47806 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC13.78□□□□□ -0.2
Gli1P47806 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gli1P47806 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gli1P47806 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Gli1P47806 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gli1P47806 Gm5628-201ENSMUST00000222318 1049 ntBASIC13.78□□□□□ -0.2
Gli1P47806 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Gli1P47806 AC119177.1-201ENSMUST00000227647 1332 ntBASIC13.78□□□□□ -0.2
Gli1P47806 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Gli1P47806 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gli1P47806 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gli1P47806 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gli1P47806 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gli1P47806 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC13.78□□□□□ -0.2
Gli1P47806 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gli1P47806 AC131743.5-201ENSMUST00000220775 1618 ntBASIC13.78□□□□□ -0.2
Gli1P47806 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gli1P47806 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gli1P47806 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gli1P47806 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gli1P47806 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Gli1P47806 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC13.78□□□□□ -0.2
Gli1P47806 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Gli1P47806 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gli1P47806 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Gli1P47806 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Gli1P47806 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gli1P47806 Pcgf5-211ENSMUST00000225920 6443 ntBASIC13.77□□□□□ -0.2
Gli1P47806 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Gli1P47806 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
Gli1P47806 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Gli1P47806 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Gli1P47806 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC13.77□□□□□ -0.21
Gli1P47806 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC13.77□□□□□ -0.21
Gli1P47806 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Gli1P47806 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC13.77□□□□□ -0.21
Gli1P47806 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
Gli1P47806 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC13.77□□□□□ -0.21
Gli1P47806 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Gli1P47806 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Gli1P47806 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Gli1P47806 Gm7774-201ENSMUST00000200064 533 ntBASIC13.77□□□□□ -0.21
Gli1P47806 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Gli1P47806 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC13.77□□□□□ -0.21
Gli1P47806 Gm5626-201ENSMUST00000222151 1058 ntBASIC13.77□□□□□ -0.21
Gli1P47806 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Gli1P47806 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Gli1P47806 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Gli1P47806 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Gli1P47806 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Gli1P47806 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Gli1P47806 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Gli1P47806 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Gli1P47806 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Gli1P47806 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC13.77□□□□□ -0.21
Gli1P47806 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
Gli1P47806 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
Gli1P47806 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Gli1P47806 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Gli1P47806 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms