Protein–RNA interactions for Protein: P43247

Msh2, DNA mismatch repair protein Msh2, mousemouse

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh2P43247 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Msh2P43247 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Msh2P43247 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Msh2P43247 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Msh2P43247 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Msh2P43247 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Msh2P43247 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC14.55□□□□□ -0.08
Msh2P43247 Gm6736-201ENSMUST00000166583 948 ntBASIC14.55□□□□□ -0.08
Msh2P43247 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC14.55□□□□□ -0.08
Msh2P43247 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC14.55□□□□□ -0.08
Msh2P43247 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC14.55□□□□□ -0.08
Msh2P43247 AC124549.3-201ENSMUST00000225541 367 ntBASIC14.55□□□□□ -0.08
Msh2P43247 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC14.55□□□□□ -0.08
Msh2P43247 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Msh2P43247 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Msh2P43247 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Msh2P43247 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Msh2P43247 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Msh2P43247 Il17rd-203ENSMUST00000225146 3366 ntBASIC14.55□□□□□ -0.08
Msh2P43247 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Msh2P43247 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Msh2P43247 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Msh2P43247 AC139054.1-201ENSMUST00000226898 1598 ntBASIC14.55□□□□□ -0.08
Msh2P43247 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Msh2P43247 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Msh2P43247 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Msh2P43247 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Msh2P43247 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Msh2P43247 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Msh2P43247 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Msh2P43247 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Msh2P43247 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Msh2P43247 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Msh2P43247 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Msh2P43247 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Msh2P43247 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Msh2P43247 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Msh2P43247 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Msh2P43247 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
Msh2P43247 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Msh2P43247 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Msh2P43247 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
Msh2P43247 Gm27494-201ENSMUST00000184735 189 ntBASIC14.54□□□□□ -0.08
Msh2P43247 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Msh2P43247 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC14.54□□□□□ -0.08
Msh2P43247 Gm18041-201ENSMUST00000218210 618 ntBASIC14.54□□□□□ -0.08
Msh2P43247 CT030684.1-201ENSMUST00000227292 914 ntBASIC14.54□□□□□ -0.08
Msh2P43247 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Msh2P43247 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
Msh2P43247 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Msh2P43247 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Msh2P43247 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Msh2P43247 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Msh2P43247 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Msh2P43247 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Msh2P43247 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Msh2P43247 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Msh2P43247 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Msh2P43247 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Msh2P43247 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Msh2P43247 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Msh2P43247 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC14.53□□□□□ -0.08
Msh2P43247 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC14.53□□□□□ -0.08
Msh2P43247 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Msh2P43247 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Msh2P43247 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Msh2P43247 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Msh2P43247 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Msh2P43247 Gm14371-201ENSMUST00000138925 1518 ntBASIC14.53□□□□□ -0.08
Msh2P43247 Gm13233-201ENSMUST00000118760 1443 ntBASIC14.53□□□□□ -0.08
Msh2P43247 Gm13244-201ENSMUST00000118855 1446 ntBASIC14.53□□□□□ -0.08
Msh2P43247 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Msh2P43247 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC14.53□□□□□ -0.08
Msh2P43247 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC14.53□□□□□ -0.08
Msh2P43247 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Msh2P43247 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Msh2P43247 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Msh2P43247 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC14.53□□□□□ -0.08
Msh2P43247 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Msh2P43247 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Msh2P43247 Mir1895-201ENSMUST00000122615 79 ntBASIC14.53□□□□□ -0.08
Msh2P43247 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Msh2P43247 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Msh2P43247 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Msh2P43247 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Msh2P43247 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC14.53□□□□□ -0.08
Msh2P43247 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Msh2P43247 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Msh2P43247 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Msh2P43247 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Msh2P43247 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Msh2P43247 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Msh2P43247 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
Msh2P43247 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Msh2P43247 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Msh2P43247 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Msh2P43247 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Msh2P43247 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Msh2P43247 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Msh2P43247 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms