Protein–RNA interactions for Protein: P42580

Nkx1-2, NK1 transcription factor-related protein 2, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-2P42580 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nkx1-2P42580 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC17.34■□□□□ 0.37
Nkx1-2P42580 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC17.34■□□□□ 0.37
Nkx1-2P42580 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nkx1-2P42580 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nkx1-2P42580 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nkx1-2P42580 Gm5264-201ENSMUST00000190584 848 ntBASIC17.34■□□□□ 0.37
Nkx1-2P42580 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Nkx1-2P42580 Gm42934-201ENSMUST00000196920 1345 ntBASIC17.34■□□□□ 0.37
Nkx1-2P42580 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC17.34■□□□□ 0.37
Nkx1-2P42580 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Nkx1-2P42580 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC17.34■□□□□ 0.37
Nkx1-2P42580 Gm18057-201ENSMUST00000208220 503 ntBASIC17.34■□□□□ 0.37
Nkx1-2P42580 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Nkx1-2P42580 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC17.34■□□□□ 0.37
Nkx1-2P42580 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC17.34■□□□□ 0.37
Nkx1-2P42580 Gm5628-201ENSMUST00000222318 1049 ntBASIC17.34■□□□□ 0.37
Nkx1-2P42580 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC17.34■□□□□ 0.37
Nkx1-2P42580 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nkx1-2P42580 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nkx1-2P42580 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nkx1-2P42580 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Nkx1-2P42580 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nkx1-2P42580 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC17.34■□□□□ 0.37
Nkx1-2P42580 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nkx1-2P42580 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nkx1-2P42580 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nkx1-2P42580 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nkx1-2P42580 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nkx1-2P42580 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Nkx1-2P42580 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Nkx1-2P42580 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nkx1-2P42580 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nkx1-2P42580 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nkx1-2P42580 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nkx1-2P42580 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Nkx1-2P42580 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC17.33■□□□□ 0.36
Nkx1-2P42580 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nkx1-2P42580 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
Nkx1-2P42580 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC17.33■□□□□ 0.36
Nkx1-2P42580 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nkx1-2P42580 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Nkx1-2P42580 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nkx1-2P42580 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC17.33■□□□□ 0.36
Nkx1-2P42580 Gm12017-201ENSMUST00000122453 1003 ntBASIC17.33■□□□□ 0.36
Nkx1-2P42580 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC17.33■□□□□ 0.36
Nkx1-2P42580 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC17.33■□□□□ 0.36
Nkx1-2P42580 AC155252.2-201ENSMUST00000226946 680 ntBASIC17.33■□□□□ 0.36
Nkx1-2P42580 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Nkx1-2P42580 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Nkx1-2P42580 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nkx1-2P42580 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nkx1-2P42580 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nkx1-2P42580 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nkx1-2P42580 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nkx1-2P42580 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Nkx1-2P42580 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Nkx1-2P42580 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nkx1-2P42580 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nkx1-2P42580 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nkx1-2P42580 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nkx1-2P42580 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nkx1-2P42580 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC17.32■□□□□ 0.36
Nkx1-2P42580 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nkx1-2P42580 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC17.32■□□□□ 0.36
Nkx1-2P42580 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nkx1-2P42580 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Nkx1-2P42580 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Nkx1-2P42580 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nkx1-2P42580 Gm2810-201ENSMUST00000118681 990 ntBASIC17.32■□□□□ 0.36
Nkx1-2P42580 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC17.32■□□□□ 0.36
Nkx1-2P42580 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Nkx1-2P42580 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nkx1-2P42580 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC17.32■□□□□ 0.36
Nkx1-2P42580 Gm18041-201ENSMUST00000218210 618 ntBASIC17.32■□□□□ 0.36
Nkx1-2P42580 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nkx1-2P42580 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Nkx1-2P42580 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nkx1-2P42580 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC17.32■□□□□ 0.36
Nkx1-2P42580 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nkx1-2P42580 Nrn1-204ENSMUST00000224323 1779 ntBASIC17.32■□□□□ 0.36
Nkx1-2P42580 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nkx1-2P42580 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nkx1-2P42580 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nkx1-2P42580 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Nkx1-2P42580 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nkx1-2P42580 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nkx1-2P42580 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Nkx1-2P42580 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Nkx1-2P42580 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nkx1-2P42580 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nkx1-2P42580 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Nkx1-2P42580 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nkx1-2P42580 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nkx1-2P42580 AC115735.4-201ENSMUST00000227460 1944 ntBASIC17.31■□□□□ 0.36
Nkx1-2P42580 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nkx1-2P42580 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Nkx1-2P42580 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nkx1-2P42580 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Nkx1-2P42580 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms