Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cxcl12P40224 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cxcl12P40224 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cxcl12P40224 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Cxcl12P40224 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cxcl12P40224 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cxcl12P40224 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cxcl12P40224 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cxcl12P40224 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cxcl12P40224 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cxcl12P40224 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cxcl12P40224 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cxcl12P40224 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cxcl12P40224 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cxcl12P40224 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cxcl12P40224 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cxcl12P40224 Gm9109-201ENSMUST00000120254 1405 ntBASIC14.41□□□□□ -0.1
Cxcl12P40224 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Cxcl12P40224 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cxcl12P40224 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cxcl12P40224 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cxcl12P40224 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cxcl12P40224 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cxcl12P40224 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cxcl12P40224 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Cxcl12P40224 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Cxcl12P40224 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cxcl12P40224 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cxcl12P40224 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Cxcl12P40224 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cxcl12P40224 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cxcl12P40224 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC14.41□□□□□ -0.1
Cxcl12P40224 Gm6334-201ENSMUST00000207083 228 ntBASIC14.41□□□□□ -0.1
Cxcl12P40224 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC14.41□□□□□ -0.1
Cxcl12P40224 AC102291.3-201ENSMUST00000226566 405 ntBASIC14.41□□□□□ -0.1
Cxcl12P40224 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cxcl12P40224 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cxcl12P40224 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cxcl12P40224 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cxcl12P40224 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Cxcl12P40224 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cxcl12P40224 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cxcl12P40224 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cxcl12P40224 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cxcl12P40224 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC14.41□□□□□ -0.1
Cxcl12P40224 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cxcl12P40224 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cxcl12P40224 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Cxcl12P40224 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cxcl12P40224 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC14.4□□□□□ -0.1
Cxcl12P40224 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Cxcl12P40224 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cxcl12P40224 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Cxcl12P40224 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC14.4□□□□□ -0.1
Cxcl12P40224 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cxcl12P40224 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cxcl12P40224 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC14.4□□□□□ -0.1
Cxcl12P40224 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC14.4□□□□□ -0.1
Cxcl12P40224 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC14.4□□□□□ -0.1
Cxcl12P40224 Mir7070-201ENSMUST00000183657 86 ntBASIC14.4□□□□□ -0.1
Cxcl12P40224 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC14.4□□□□□ -0.1
Cxcl12P40224 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC14.4□□□□□ -0.1
Cxcl12P40224 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cxcl12P40224 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Cxcl12P40224 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cxcl12P40224 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cxcl12P40224 Mir497b-201ENSMUST00000093601 125 ntBASIC14.4□□□□□ -0.1
Cxcl12P40224 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cxcl12P40224 Ccdc166-201ENSMUST00000182172 2584 ntBASIC14.4□□□□□ -0.1
Cxcl12P40224 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cxcl12P40224 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cxcl12P40224 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Cxcl12P40224 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cxcl12P40224 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.11
Cxcl12P40224 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cxcl12P40224 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cxcl12P40224 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cxcl12P40224 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC14.39□□□□□ -0.11
Cxcl12P40224 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cxcl12P40224 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cxcl12P40224 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cxcl12P40224 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Cxcl12P40224 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cxcl12P40224 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cxcl12P40224 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cxcl12P40224 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Cxcl12P40224 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cxcl12P40224 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC14.39□□□□□ -0.11
Cxcl12P40224 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC14.39□□□□□ -0.11
Cxcl12P40224 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC14.39□□□□□ -0.11
Cxcl12P40224 Gm29396-201ENSMUST00000185659 716 ntBASIC14.39□□□□□ -0.11
Cxcl12P40224 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC14.39□□□□□ -0.11
Cxcl12P40224 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
Cxcl12P40224 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Cxcl12P40224 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Cxcl12P40224 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cxcl12P40224 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cxcl12P40224 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cxcl12P40224 Gm13859-201ENSMUST00000119936 1423 ntBASIC14.39□□□□□ -0.11
Cxcl12P40224 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms