Protein–RNA interactions for Protein: P38060

Hmgcl, Hydroxymethylglutaryl-CoA lyase, mitochondrial, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmgclP38060 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
HmgclP38060 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HmgclP38060 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
HmgclP38060 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HmgclP38060 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HmgclP38060 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HmgclP38060 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HmgclP38060 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HmgclP38060 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HmgclP38060 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HmgclP38060 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HmgclP38060 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HmgclP38060 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
HmgclP38060 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HmgclP38060 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HmgclP38060 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
HmgclP38060 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HmgclP38060 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
HmgclP38060 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
HmgclP38060 Gm12020-201ENSMUST00000119030 2042 ntBASIC13.9□□□□□ -0.18
HmgclP38060 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HmgclP38060 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
HmgclP38060 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HmgclP38060 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC13.9□□□□□ -0.18
HmgclP38060 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC13.9□□□□□ -0.18
HmgclP38060 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
HmgclP38060 Gm33320-201ENSMUST00000192232 530 ntBASIC13.9□□□□□ -0.18
HmgclP38060 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC13.9□□□□□ -0.18
HmgclP38060 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HmgclP38060 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
HmgclP38060 AC154806.6-201ENSMUST00000228192 202 ntBASIC13.9□□□□□ -0.18
HmgclP38060 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
HmgclP38060 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
HmgclP38060 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
HmgclP38060 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
HmgclP38060 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
HmgclP38060 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
HmgclP38060 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
HmgclP38060 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
HmgclP38060 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
HmgclP38060 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HmgclP38060 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HmgclP38060 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC13.9□□□□□ -0.19
HmgclP38060 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
HmgclP38060 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.19
HmgclP38060 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.19
HmgclP38060 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
HmgclP38060 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
HmgclP38060 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HmgclP38060 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
HmgclP38060 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
HmgclP38060 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
HmgclP38060 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
HmgclP38060 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
HmgclP38060 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
HmgclP38060 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
HmgclP38060 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
HmgclP38060 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HmgclP38060 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
HmgclP38060 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
HmgclP38060 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
HmgclP38060 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC13.89□□□□□ -0.19
HmgclP38060 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC13.89□□□□□ -0.19
HmgclP38060 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC13.89□□□□□ -0.19
HmgclP38060 Gm14767-201ENSMUST00000121559 586 ntBASIC13.89□□□□□ -0.19
HmgclP38060 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
HmgclP38060 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC13.89□□□□□ -0.19
HmgclP38060 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
HmgclP38060 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
HmgclP38060 Gm27680-201ENSMUST00000184192 160 ntBASIC13.89□□□□□ -0.19
HmgclP38060 Gm38294-201ENSMUST00000192831 381 ntBASIC13.89□□□□□ -0.19
HmgclP38060 Gm37714-201ENSMUST00000194742 342 ntBASIC13.89□□□□□ -0.19
HmgclP38060 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC13.89□□□□□ -0.19
HmgclP38060 Gm46209-201ENSMUST00000217912 553 ntBASIC13.89□□□□□ -0.19
HmgclP38060 Gm6888-201ENSMUST00000221983 706 ntBASIC13.89□□□□□ -0.19
HmgclP38060 Gm9229-201ENSMUST00000222777 126 ntBASIC13.89□□□□□ -0.19
HmgclP38060 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
HmgclP38060 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HmgclP38060 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
HmgclP38060 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HmgclP38060 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
HmgclP38060 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HmgclP38060 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
HmgclP38060 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
HmgclP38060 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HmgclP38060 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HmgclP38060 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
HmgclP38060 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC13.88□□□□□ -0.19
HmgclP38060 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
HmgclP38060 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
HmgclP38060 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
HmgclP38060 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
HmgclP38060 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HmgclP38060 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
HmgclP38060 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
HmgclP38060 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
HmgclP38060 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HmgclP38060 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
HmgclP38060 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HmgclP38060 Gm44291-201ENSMUST00000203102 2865 ntBASIC13.88□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms