Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LdlrP35951 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC14.05□□□□□ -0.16
LdlrP35951 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC14.05□□□□□ -0.16
LdlrP35951 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC14.05□□□□□ -0.16
LdlrP35951 Gm45098-201ENSMUST00000207179 657 ntBASIC14.05□□□□□ -0.16
LdlrP35951 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LdlrP35951 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
LdlrP35951 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
LdlrP35951 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC14.05□□□□□ -0.16
LdlrP35951 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LdlrP35951 Fgf17-202ENSMUST00000227123 1336 ntBASIC14.05□□□□□ -0.16
LdlrP35951 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
LdlrP35951 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LdlrP35951 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
LdlrP35951 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LdlrP35951 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LdlrP35951 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
LdlrP35951 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LdlrP35951 Gm18244-201ENSMUST00000219747 1566 ntBASIC14.05□□□□□ -0.16
LdlrP35951 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
LdlrP35951 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
LdlrP35951 Gm15889-202ENSMUST00000212669 2443 ntBASIC14.04□□□□□ -0.16
LdlrP35951 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
LdlrP35951 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
LdlrP35951 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LdlrP35951 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LdlrP35951 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
LdlrP35951 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
LdlrP35951 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LdlrP35951 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
LdlrP35951 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
LdlrP35951 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
LdlrP35951 Gm6226-201ENSMUST00000117765 1146 ntBASIC14.04□□□□□ -0.16
LdlrP35951 Gm16198-201ENSMUST00000118766 670 ntBASIC14.04□□□□□ -0.16
LdlrP35951 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LdlrP35951 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC14.04□□□□□ -0.16
LdlrP35951 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LdlrP35951 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC14.04□□□□□ -0.16
LdlrP35951 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LdlrP35951 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC14.04□□□□□ -0.16
LdlrP35951 Gm43474-201ENSMUST00000196415 774 ntBASIC14.04□□□□□ -0.16
LdlrP35951 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
LdlrP35951 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LdlrP35951 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LdlrP35951 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC14.04□□□□□ -0.16
LdlrP35951 Gm10154-201ENSMUST00000084445 354 ntBASIC14.04□□□□□ -0.16
LdlrP35951 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
LdlrP35951 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LdlrP35951 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
LdlrP35951 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LdlrP35951 Gm13233-201ENSMUST00000118760 1443 ntBASIC14.04□□□□□ -0.16
LdlrP35951 Gm13244-201ENSMUST00000118855 1446 ntBASIC14.04□□□□□ -0.16
LdlrP35951 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LdlrP35951 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
LdlrP35951 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LdlrP35951 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LdlrP35951 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
LdlrP35951 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
LdlrP35951 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
LdlrP35951 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
LdlrP35951 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LdlrP35951 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
LdlrP35951 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
LdlrP35951 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LdlrP35951 Gm6198-201ENSMUST00000191337 2929 ntBASIC14.03□□□□□ -0.16
LdlrP35951 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LdlrP35951 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LdlrP35951 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LdlrP35951 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC14.03□□□□□ -0.16
LdlrP35951 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC14.03□□□□□ -0.16
LdlrP35951 Gm25948-201ENSMUST00000175334 112 ntBASIC14.03□□□□□ -0.16
LdlrP35951 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LdlrP35951 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC14.03□□□□□ -0.16
LdlrP35951 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LdlrP35951 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC14.03□□□□□ -0.16
LdlrP35951 Gm5628-201ENSMUST00000222318 1049 ntBASIC14.03□□□□□ -0.16
LdlrP35951 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LdlrP35951 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LdlrP35951 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LdlrP35951 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LdlrP35951 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LdlrP35951 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
LdlrP35951 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LdlrP35951 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LdlrP35951 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LdlrP35951 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
LdlrP35951 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LdlrP35951 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LdlrP35951 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LdlrP35951 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC14.03□□□□□ -0.16
LdlrP35951 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LdlrP35951 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LdlrP35951 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
LdlrP35951 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
LdlrP35951 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LdlrP35951 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC14.02□□□□□ -0.16
LdlrP35951 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LdlrP35951 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
LdlrP35951 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
LdlrP35951 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms