Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 CT030684.1-201ENSMUST00000227292 914 ntBASIC14.46□□□□□ -0.09
Mmp13P33435 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Mmp13P33435 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Mmp13P33435 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC14.46□□□□□ -0.09
Mmp13P33435 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Mmp13P33435 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Mmp13P33435 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Mmp13P33435 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Mmp13P33435 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Mmp13P33435 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Mmp13P33435 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Mmp13P33435 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Mmp13P33435 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.1
Mmp13P33435 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Mmp13P33435 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Mmp13P33435 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC14.45□□□□□ -0.1
Mmp13P33435 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Mmp13P33435 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Mmp13P33435 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Mmp13P33435 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Mmp13P33435 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
Mmp13P33435 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC14.45□□□□□ -0.1
Mmp13P33435 Gm13233-201ENSMUST00000118760 1443 ntBASIC14.45□□□□□ -0.1
Mmp13P33435 Gm13244-201ENSMUST00000118855 1446 ntBASIC14.45□□□□□ -0.1
Mmp13P33435 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC14.45□□□□□ -0.1
Mmp13P33435 Gm18889-201ENSMUST00000174284 929 ntBASIC14.45□□□□□ -0.1
Mmp13P33435 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC14.45□□□□□ -0.1
Mmp13P33435 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Mmp13P33435 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Mmp13P33435 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Mmp13P33435 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Mmp13P33435 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Mmp13P33435 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Mmp13P33435 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Mmp13P33435 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
Mmp13P33435 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Mmp13P33435 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC14.45□□□□□ -0.1
Mmp13P33435 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC14.45□□□□□ -0.1
Mmp13P33435 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Mmp13P33435 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Mmp13P33435 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Mmp13P33435 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC14.44□□□□□ -0.1
Mmp13P33435 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC14.44□□□□□ -0.1
Mmp13P33435 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Mmp13P33435 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Mmp13P33435 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Mmp13P33435 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Mmp13P33435 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Mmp13P33435 Gm6973-201ENSMUST00000117080 721 ntBASIC14.44□□□□□ -0.1
Mmp13P33435 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Mmp13P33435 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Mmp13P33435 Mir6990-201ENSMUST00000183724 91 ntBASIC14.44□□□□□ -0.1
Mmp13P33435 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Mmp13P33435 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Mmp13P33435 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC14.44□□□□□ -0.1
Mmp13P33435 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
Mmp13P33435 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Mmp13P33435 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC14.44□□□□□ -0.1
Mmp13P33435 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
Mmp13P33435 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC14.44□□□□□ -0.1
Mmp13P33435 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Mmp13P33435 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Mmp13P33435 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Mmp13P33435 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Mmp13P33435 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Mmp13P33435 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Mmp13P33435 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Mmp13P33435 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Mmp13P33435 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Mmp13P33435 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Mmp13P33435 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Mmp13P33435 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Mmp13P33435 Gm6018-201ENSMUST00000216090 1306 ntBASIC14.43□□□□□ -0.1
Mmp13P33435 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Mmp13P33435 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Mmp13P33435 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Mmp13P33435 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
Mmp13P33435 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Mmp13P33435 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Mmp13P33435 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Mmp13P33435 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Mmp13P33435 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Mmp13P33435 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC14.43□□□□□ -0.1
Mmp13P33435 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Mmp13P33435 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Mmp13P33435 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Mmp13P33435 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Mmp13P33435 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC14.43□□□□□ -0.1
Mmp13P33435 Gm43125-201ENSMUST00000201724 730 ntBASIC14.43□□□□□ -0.1
Mmp13P33435 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC14.43□□□□□ -0.1
Mmp13P33435 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Mmp13P33435 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
Mmp13P33435 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
Mmp13P33435 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Mmp13P33435 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Mmp13P33435 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Mmp13P33435 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Mmp13P33435 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Mmp13P33435 Gm12626-201ENSMUST00000117339 1983 ntBASIC14.43□□□□□ -0.1
Mmp13P33435 Gm12623-201ENSMUST00000119849 1983 ntBASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms