Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Slc6a1P31648 Gm11764-201ENSMUST00000120221 623 ntBASIC12.15□□□□□ -0.46
Slc6a1P31648 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC12.15□□□□□ -0.46
Slc6a1P31648 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Slc6a1P31648 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Slc6a1P31648 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC12.15□□□□□ -0.46
Slc6a1P31648 Gm10499-201ENSMUST00000174094 934 ntBASIC12.15□□□□□ -0.46
Slc6a1P31648 Gm6550-201ENSMUST00000187574 993 ntBASIC12.15□□□□□ -0.46
Slc6a1P31648 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC12.15□□□□□ -0.46
Slc6a1P31648 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Slc6a1P31648 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Slc6a1P31648 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Slc6a1P31648 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Slc6a1P31648 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Slc6a1P31648 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Slc6a1P31648 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.15□□□□□ -0.46
Slc6a1P31648 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Slc6a1P31648 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Slc6a1P31648 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
Slc6a1P31648 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.15□□□□□ -0.46
Slc6a1P31648 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Slc6a1P31648 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Slc6a1P31648 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Slc6a1P31648 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Slc6a1P31648 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Slc6a1P31648 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Slc6a1P31648 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Slc6a1P31648 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Slc6a1P31648 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.14□□□□□ -0.47
Slc6a1P31648 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC12.14□□□□□ -0.47
Slc6a1P31648 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Slc6a1P31648 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Slc6a1P31648 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Slc6a1P31648 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Slc6a1P31648 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Slc6a1P31648 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Slc6a1P31648 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Slc6a1P31648 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Slc6a1P31648 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Slc6a1P31648 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Slc6a1P31648 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Slc6a1P31648 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC12.14□□□□□ -0.47
Slc6a1P31648 Gm11780-201ENSMUST00000136880 516 ntBASIC12.14□□□□□ -0.47
Slc6a1P31648 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC12.14□□□□□ -0.47
Slc6a1P31648 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Slc6a1P31648 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC12.14□□□□□ -0.47
Slc6a1P31648 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC12.14□□□□□ -0.47
Slc6a1P31648 Gm18622-201ENSMUST00000219361 595 ntBASIC12.14□□□□□ -0.47
Slc6a1P31648 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC12.14□□□□□ -0.47
Slc6a1P31648 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Slc6a1P31648 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Slc6a1P31648 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Slc6a1P31648 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Slc6a1P31648 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Slc6a1P31648 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Slc6a1P31648 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Slc6a1P31648 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Slc6a1P31648 Gm7899-201ENSMUST00000192935 1897 ntBASIC12.14□□□□□ -0.47
Slc6a1P31648 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Slc6a1P31648 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Slc6a1P31648 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Slc6a1P31648 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Slc6a1P31648 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Slc6a1P31648 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC12.14□□□□□ -0.47
Slc6a1P31648 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
Slc6a1P31648 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Slc6a1P31648 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Slc6a1P31648 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12.13□□□□□ -0.47
Slc6a1P31648 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Slc6a1P31648 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Slc6a1P31648 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Slc6a1P31648 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Slc6a1P31648 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Slc6a1P31648 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC12.13□□□□□ -0.47
Slc6a1P31648 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Slc6a1P31648 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Slc6a1P31648 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Slc6a1P31648 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Slc6a1P31648 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Slc6a1P31648 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Slc6a1P31648 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Slc6a1P31648 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Slc6a1P31648 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Slc6a1P31648 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Slc6a1P31648 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Slc6a1P31648 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Slc6a1P31648 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Slc6a1P31648 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Slc6a1P31648 Gm14042-201ENSMUST00000120139 833 ntBASIC12.13□□□□□ -0.47
Slc6a1P31648 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC12.13□□□□□ -0.47
Slc6a1P31648 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC12.13□□□□□ -0.47
Slc6a1P31648 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Slc6a1P31648 AC122024.2-201ENSMUST00000220086 871 ntBASIC12.13□□□□□ -0.47
Slc6a1P31648 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Slc6a1P31648 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Slc6a1P31648 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Slc6a1P31648 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Slc6a1P31648 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Slc6a1P31648 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC12.13□□□□□ -0.47
Slc6a1P31648 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 76.3 ms