Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vcam1P29533 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Vcam1P29533 Gm43598-201ENSMUST00000202482 2479 ntBASIC16.13■□□□□ 0.17
Vcam1P29533 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vcam1P29533 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vcam1P29533 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Vcam1P29533 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vcam1P29533 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC16.13■□□□□ 0.17
Vcam1P29533 Gm8652-201ENSMUST00000181363 964 ntBASIC16.13■□□□□ 0.17
Vcam1P29533 Gm5069-202ENSMUST00000192714 1011 ntBASIC16.13■□□□□ 0.17
Vcam1P29533 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC16.13■□□□□ 0.17
Vcam1P29533 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vcam1P29533 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vcam1P29533 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Vcam1P29533 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Vcam1P29533 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vcam1P29533 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC16.13■□□□□ 0.17
Vcam1P29533 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vcam1P29533 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vcam1P29533 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Vcam1P29533 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Vcam1P29533 Gm45504-201ENSMUST00000211407 2107 ntBASIC16.13■□□□□ 0.17
Vcam1P29533 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vcam1P29533 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vcam1P29533 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vcam1P29533 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vcam1P29533 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.13■□□□□ 0.17
Vcam1P29533 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vcam1P29533 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Vcam1P29533 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vcam1P29533 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Vcam1P29533 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vcam1P29533 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vcam1P29533 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Vcam1P29533 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Vcam1P29533 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC16.12■□□□□ 0.17
Vcam1P29533 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Vcam1P29533 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vcam1P29533 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC16.12■□□□□ 0.17
Vcam1P29533 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Vcam1P29533 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC16.12■□□□□ 0.17
Vcam1P29533 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vcam1P29533 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vcam1P29533 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC16.12■□□□□ 0.17
Vcam1P29533 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vcam1P29533 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC16.12■□□□□ 0.17
Vcam1P29533 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vcam1P29533 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vcam1P29533 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vcam1P29533 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vcam1P29533 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vcam1P29533 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Vcam1P29533 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC16.12■□□□□ 0.17
Vcam1P29533 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vcam1P29533 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Vcam1P29533 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Vcam1P29533 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vcam1P29533 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vcam1P29533 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vcam1P29533 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vcam1P29533 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vcam1P29533 Mup-ps23-201ENSMUST00000118063 630 ntBASIC16.11■□□□□ 0.17
Vcam1P29533 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Vcam1P29533 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC16.11■□□□□ 0.17
Vcam1P29533 AY702102-202ENSMUST00000194651 1173 ntBASIC16.11■□□□□ 0.17
Vcam1P29533 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC16.11■□□□□ 0.17
Vcam1P29533 Gm7561-201ENSMUST00000211203 886 ntBASIC16.11■□□□□ 0.17
Vcam1P29533 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC16.11■□□□□ 0.17
Vcam1P29533 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vcam1P29533 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vcam1P29533 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC16.11■□□□□ 0.17
Vcam1P29533 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Vcam1P29533 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
Vcam1P29533 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vcam1P29533 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC16.11■□□□□ 0.17
Vcam1P29533 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vcam1P29533 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vcam1P29533 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vcam1P29533 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vcam1P29533 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Vcam1P29533 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vcam1P29533 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Vcam1P29533 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Vcam1P29533 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vcam1P29533 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vcam1P29533 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vcam1P29533 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vcam1P29533 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vcam1P29533 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vcam1P29533 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vcam1P29533 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vcam1P29533 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC16.1■□□□□ 0.17
Vcam1P29533 Gm11814-201ENSMUST00000119515 929 ntBASIC16.1■□□□□ 0.17
Vcam1P29533 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC16.1■□□□□ 0.17
Vcam1P29533 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC16.1■□□□□ 0.17
Vcam1P29533 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Vcam1P29533 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vcam1P29533 Gm5161-201ENSMUST00000075243 853 ntBASIC16.1■□□□□ 0.17
Vcam1P29533 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vcam1P29533 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms