Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nckap1P28660 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Nckap1P28660 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Nckap1P28660 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Nckap1P28660 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nckap1P28660 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC14.03□□□□□ -0.16
Nckap1P28660 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nckap1P28660 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nckap1P28660 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nckap1P28660 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nckap1P28660 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Nckap1P28660 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nckap1P28660 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Nckap1P28660 Gm11918-201ENSMUST00000121660 179 ntBASIC14.03□□□□□ -0.16
Nckap1P28660 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Nckap1P28660 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Nckap1P28660 Gm5354-201ENSMUST00000182417 973 ntBASIC14.03□□□□□ -0.16
Nckap1P28660 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC14.03□□□□□ -0.16
Nckap1P28660 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nckap1P28660 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC14.03□□□□□ -0.16
Nckap1P28660 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nckap1P28660 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nckap1P28660 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nckap1P28660 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Nckap1P28660 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Nckap1P28660 Gm14452-201ENSMUST00000118680 1632 ntBASIC14.03□□□□□ -0.16
Nckap1P28660 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nckap1P28660 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nckap1P28660 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Nckap1P28660 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nckap1P28660 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Nckap1P28660 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nckap1P28660 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nckap1P28660 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nckap1P28660 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Nckap1P28660 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nckap1P28660 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC14.02□□□□□ -0.16
Nckap1P28660 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC14.02□□□□□ -0.16
Nckap1P28660 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Nckap1P28660 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Nckap1P28660 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Nckap1P28660 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.17
Nckap1P28660 Gm15163-201ENSMUST00000120749 1302 ntBASIC14.02□□□□□ -0.17
Nckap1P28660 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Nckap1P28660 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC14.02□□□□□ -0.17
Nckap1P28660 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Nckap1P28660 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Nckap1P28660 Ldha-ps-201ENSMUST00000119390 995 ntBASIC14.02□□□□□ -0.17
Nckap1P28660 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Nckap1P28660 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC14.02□□□□□ -0.17
Nckap1P28660 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Nckap1P28660 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC14.02□□□□□ -0.17
Nckap1P28660 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Nckap1P28660 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Nckap1P28660 Gm43433-201ENSMUST00000196573 481 ntBASIC14.02□□□□□ -0.17
Nckap1P28660 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nckap1P28660 Gm17795-201ENSMUST00000214505 757 ntBASIC14.02□□□□□ -0.17
Nckap1P28660 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nckap1P28660 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nckap1P28660 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nckap1P28660 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nckap1P28660 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nckap1P28660 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Nckap1P28660 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Nckap1P28660 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Nckap1P28660 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Nckap1P28660 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Nckap1P28660 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nckap1P28660 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nckap1P28660 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Nckap1P28660 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nckap1P28660 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nckap1P28660 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Nckap1P28660 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nckap1P28660 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Nckap1P28660 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nckap1P28660 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Nckap1P28660 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nckap1P28660 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Nckap1P28660 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Nckap1P28660 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nckap1P28660 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Nckap1P28660 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nckap1P28660 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Nckap1P28660 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Nckap1P28660 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Nckap1P28660 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nckap1P28660 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nckap1P28660 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nckap1P28660 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Nckap1P28660 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC14.01□□□□□ -0.17
Nckap1P28660 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC14.01□□□□□ -0.17
Nckap1P28660 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC14.01□□□□□ -0.17
Nckap1P28660 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC14.01□□□□□ -0.17
Nckap1P28660 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nckap1P28660 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nckap1P28660 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nckap1P28660 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Nckap1P28660 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nckap1P28660 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms