Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pde6aP27664 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC16.35■□□□□ 0.21
Pde6aP27664 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pde6aP27664 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Pde6aP27664 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Pde6aP27664 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pde6aP27664 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
Pde6aP27664 Mir7684-201ENSMUST00000183858 60 ntBASIC16.35■□□□□ 0.21
Pde6aP27664 Mir8102-201ENSMUST00000184148 139 ntBASIC16.35■□□□□ 0.21
Pde6aP27664 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pde6aP27664 Gm7390-201ENSMUST00000212452 1216 ntBASIC16.35■□□□□ 0.21
Pde6aP27664 AC238811.1-201ENSMUST00000225302 441 ntBASIC16.35■□□□□ 0.21
Pde6aP27664 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC16.35■□□□□ 0.21
Pde6aP27664 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Pde6aP27664 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Pde6aP27664 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pde6aP27664 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Pde6aP27664 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pde6aP27664 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pde6aP27664 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pde6aP27664 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC16.35■□□□□ 0.21
Pde6aP27664 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pde6aP27664 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Pde6aP27664 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pde6aP27664 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pde6aP27664 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Pde6aP27664 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pde6aP27664 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pde6aP27664 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC16.34■□□□□ 0.21
Pde6aP27664 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pde6aP27664 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
Pde6aP27664 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Pde6aP27664 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pde6aP27664 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pde6aP27664 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pde6aP27664 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC16.34■□□□□ 0.21
Pde6aP27664 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Pde6aP27664 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Pde6aP27664 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Pde6aP27664 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC16.34■□□□□ 0.21
Pde6aP27664 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pde6aP27664 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pde6aP27664 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pde6aP27664 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pde6aP27664 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Pde6aP27664 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Pde6aP27664 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pde6aP27664 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Pde6aP27664 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pde6aP27664 AC114543.1-201ENSMUST00000226451 1558 ntBASIC16.34■□□□□ 0.21
Pde6aP27664 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pde6aP27664 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pde6aP27664 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pde6aP27664 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Pde6aP27664 Gm43056-201ENSMUST00000197865 2791 ntBASIC16.33■□□□□ 0.21
Pde6aP27664 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Pde6aP27664 Gm37912-201ENSMUST00000191895 3076 ntBASIC16.33■□□□□ 0.21
Pde6aP27664 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Pde6aP27664 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Pde6aP27664 Gm12585-201ENSMUST00000117307 290 ntBASIC16.33■□□□□ 0.2
Pde6aP27664 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
Pde6aP27664 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
Pde6aP27664 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC16.33■□□□□ 0.2
Pde6aP27664 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC16.33■□□□□ 0.2
Pde6aP27664 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC16.33■□□□□ 0.2
Pde6aP27664 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC16.33■□□□□ 0.2
Pde6aP27664 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pde6aP27664 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pde6aP27664 Gm6263-201ENSMUST00000120029 1342 ntBASIC16.33■□□□□ 0.2
Pde6aP27664 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pde6aP27664 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Pde6aP27664 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Pde6aP27664 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pde6aP27664 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC16.33■□□□□ 0.2
Pde6aP27664 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pde6aP27664 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pde6aP27664 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Pde6aP27664 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Pde6aP27664 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
Pde6aP27664 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Pde6aP27664 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pde6aP27664 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC16.32■□□□□ 0.2
Pde6aP27664 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC16.32■□□□□ 0.2
Pde6aP27664 Gm14719-201ENSMUST00000121891 340 ntBASIC16.32■□□□□ 0.2
Pde6aP27664 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC16.32■□□□□ 0.2
Pde6aP27664 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Pde6aP27664 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Pde6aP27664 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC16.32■□□□□ 0.2
Pde6aP27664 AC132863.2-201ENSMUST00000226643 799 ntBASIC16.32■□□□□ 0.2
Pde6aP27664 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC16.32■□□□□ 0.2
Pde6aP27664 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pde6aP27664 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC16.32■□□□□ 0.2
Pde6aP27664 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pde6aP27664 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pde6aP27664 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pde6aP27664 Mir497b-201ENSMUST00000093601 125 ntBASIC16.32■□□□□ 0.2
Pde6aP27664 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pde6aP27664 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Pde6aP27664 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC16.32■□□□□ 0.2
Pde6aP27664 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms