Protein–RNA interactions for Protein: P21107

Tpm3, Tropomyosin alpha-3 chain, mousemouse

Known RBP Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm3P21107 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tpm3P21107 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Tpm3P21107 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Tpm3P21107 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tpm3P21107 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Tpm3P21107 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Tpm3P21107 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Tpm3P21107 Gm37584-201ENSMUST00000193595 1290 ntBASIC15.81■□□□□ 0.12
Tpm3P21107 Gm13830-205ENSMUST00000201195 1155 ntBASIC15.81■□□□□ 0.12
Tpm3P21107 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Tpm3P21107 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Tpm3P21107 AC154757.1-201ENSMUST00000228289 336 ntBASIC15.81■□□□□ 0.12
Tpm3P21107 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tpm3P21107 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Tpm3P21107 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tpm3P21107 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tpm3P21107 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tpm3P21107 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Tpm3P21107 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tpm3P21107 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC15.81■□□□□ 0.12
Tpm3P21107 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tpm3P21107 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Tpm3P21107 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Tpm3P21107 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Tpm3P21107 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Tpm3P21107 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Tpm3P21107 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC15.8■□□□□ 0.12
Tpm3P21107 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC15.8■□□□□ 0.12
Tpm3P21107 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Tpm3P21107 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Tpm3P21107 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Tpm3P21107 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Tpm3P21107 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Tpm3P21107 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Tpm3P21107 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Tpm3P21107 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Tpm3P21107 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Tpm3P21107 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Tpm3P21107 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Tpm3P21107 Gm4535-201ENSMUST00000182274 558 ntBASIC15.8■□□□□ 0.12
Tpm3P21107 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC15.8■□□□□ 0.12
Tpm3P21107 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Tpm3P21107 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Tpm3P21107 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Tpm3P21107 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Tpm3P21107 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Tpm3P21107 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Tpm3P21107 Gm10355-201ENSMUST00000097146 517 ntBASIC15.8■□□□□ 0.12
Tpm3P21107 Gm9924-202ENSMUST00000192760 2311 ntBASIC15.8■□□□□ 0.12
Tpm3P21107 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Tpm3P21107 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Tpm3P21107 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Tpm3P21107 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC15.8■□□□□ 0.12
Tpm3P21107 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Tpm3P21107 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Tpm3P21107 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tpm3P21107 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tpm3P21107 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Tpm3P21107 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC15.79■□□□□ 0.12
Tpm3P21107 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC15.79■□□□□ 0.12
Tpm3P21107 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tpm3P21107 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tpm3P21107 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tpm3P21107 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC15.79■□□□□ 0.12
Tpm3P21107 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tpm3P21107 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Tpm3P21107 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Tpm3P21107 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Tpm3P21107 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC15.79■□□□□ 0.12
Tpm3P21107 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Tpm3P21107 Gm9182-201ENSMUST00000217829 639 ntBASIC15.79■□□□□ 0.12
Tpm3P21107 AC131690.1-201ENSMUST00000218406 374 ntBASIC15.79■□□□□ 0.12
Tpm3P21107 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tpm3P21107 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tpm3P21107 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Tpm3P21107 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Tpm3P21107 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tpm3P21107 Mypopos-202ENSMUST00000205975 2321 ntBASIC15.79■□□□□ 0.12
Tpm3P21107 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tpm3P21107 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tpm3P21107 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tpm3P21107 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tpm3P21107 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tpm3P21107 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tpm3P21107 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Tpm3P21107 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Tpm3P21107 Gm37795-201ENSMUST00000194216 2459 ntBASIC15.78■□□□□ 0.12
Tpm3P21107 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Tpm3P21107 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Tpm3P21107 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC15.78■□□□□ 0.12
Tpm3P21107 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC15.78■□□□□ 0.12
Tpm3P21107 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC15.78■□□□□ 0.12
Tpm3P21107 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Tpm3P21107 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Tpm3P21107 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Tpm3P21107 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Tpm3P21107 Gm11780-201ENSMUST00000136880 516 ntBASIC15.78■□□□□ 0.12
Tpm3P21107 Gm37153-201ENSMUST00000193637 231 ntBASIC15.78■□□□□ 0.12
Tpm3P21107 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Tpm3P21107 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms