Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 Gm13410-201ENSMUST00000117058 1415 ntBASIC12.91□□□□□ -0.34
Hmgn1P18608 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hmgn1P18608 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Hmgn1P18608 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hmgn1P18608 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Hmgn1P18608 Gm27301-201ENSMUST00000184012 127 ntBASIC12.91□□□□□ -0.34
Hmgn1P18608 Umpk-ps-201ENSMUST00000211897 827 ntBASIC12.91□□□□□ -0.34
Hmgn1P18608 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC12.91□□□□□ -0.34
Hmgn1P18608 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hmgn1P18608 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Hmgn1P18608 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Hmgn1P18608 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hmgn1P18608 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hmgn1P18608 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
Hmgn1P18608 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hmgn1P18608 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC12.91□□□□□ -0.34
Hmgn1P18608 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Hmgn1P18608 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hmgn1P18608 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hmgn1P18608 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hmgn1P18608 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hmgn1P18608 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC12.9□□□□□ -0.34
Hmgn1P18608 Gm14752-201ENSMUST00000120719 2075 ntBASIC12.9□□□□□ -0.34
Hmgn1P18608 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Hmgn1P18608 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hmgn1P18608 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hmgn1P18608 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Hmgn1P18608 Gm9947-201ENSMUST00000067599 2920 ntBASIC12.9□□□□□ -0.34
Hmgn1P18608 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hmgn1P18608 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hmgn1P18608 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Hmgn1P18608 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hmgn1P18608 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hmgn1P18608 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hmgn1P18608 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hmgn1P18608 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC12.9□□□□□ -0.34
Hmgn1P18608 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC12.9□□□□□ -0.34
Hmgn1P18608 Gm5177-201ENSMUST00000183092 997 ntBASIC12.9□□□□□ -0.34
Hmgn1P18608 Gm27628-201ENSMUST00000184911 107 ntBASIC12.9□□□□□ -0.34
Hmgn1P18608 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hmgn1P18608 Gm15590-201ENSMUST00000078419 552 ntBASIC12.9□□□□□ -0.34
Hmgn1P18608 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Hmgn1P18608 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
Hmgn1P18608 Gm9347-201ENSMUST00000211473 1607 ntBASIC12.9□□□□□ -0.34
Hmgn1P18608 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC12.9□□□□□ -0.34
Hmgn1P18608 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hmgn1P18608 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC12.9□□□□□ -0.34
Hmgn1P18608 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC12.9□□□□□ -0.34
Hmgn1P18608 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hmgn1P18608 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Hmgn1P18608 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hmgn1P18608 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Hmgn1P18608 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.35
Hmgn1P18608 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hmgn1P18608 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Hmgn1P18608 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Hmgn1P18608 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Hmgn1P18608 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hmgn1P18608 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hmgn1P18608 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hmgn1P18608 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Hmgn1P18608 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Hmgn1P18608 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Hmgn1P18608 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hmgn1P18608 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hmgn1P18608 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hmgn1P18608 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hmgn1P18608 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hmgn1P18608 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hmgn1P18608 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hmgn1P18608 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Hmgn1P18608 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC12.89□□□□□ -0.35
Hmgn1P18608 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC12.89□□□□□ -0.35
Hmgn1P18608 Klk2-ps-201ENSMUST00000205342 571 ntBASIC12.89□□□□□ -0.35
Hmgn1P18608 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC12.89□□□□□ -0.35
Hmgn1P18608 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC12.89□□□□□ -0.35
Hmgn1P18608 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hmgn1P18608 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hmgn1P18608 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hmgn1P18608 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hmgn1P18608 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Hmgn1P18608 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC12.89□□□□□ -0.35
Hmgn1P18608 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hmgn1P18608 Gm43364-201ENSMUST00000196046 3274 ntBASIC12.89□□□□□ -0.35
Hmgn1P18608 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hmgn1P18608 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hmgn1P18608 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hmgn1P18608 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Hmgn1P18608 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hmgn1P18608 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hmgn1P18608 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hmgn1P18608 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hmgn1P18608 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hmgn1P18608 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Hmgn1P18608 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Hmgn1P18608 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Hmgn1P18608 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Hmgn1P18608 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hmgn1P18608 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hmgn1P18608 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms