Protein–RNA interactions for Protein: P0C8K7

Smim1, Small integral membrane protein 1, mousemouse

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1P0C8K7 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Smim1P0C8K7 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Smim1P0C8K7 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Smim1P0C8K7 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Smim1P0C8K7 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Smim1P0C8K7 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Smim1P0C8K7 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Smim1P0C8K7 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Smim1P0C8K7 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Smim1P0C8K7 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Smim1P0C8K7 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Smim1P0C8K7 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Smim1P0C8K7 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC9.68□□□□□ -0.86
Smim1P0C8K7 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC9.68□□□□□ -0.86
Smim1P0C8K7 AC127349.1-201ENSMUST00000224590 266 ntBASIC9.68□□□□□ -0.86
Smim1P0C8K7 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Smim1P0C8K7 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Smim1P0C8K7 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Smim1P0C8K7 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Smim1P0C8K7 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Smim1P0C8K7 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC9.68□□□□□ -0.86
Smim1P0C8K7 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Smim1P0C8K7 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Smim1P0C8K7 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Smim1P0C8K7 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Smim1P0C8K7 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Smim1P0C8K7 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Smim1P0C8K7 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
Smim1P0C8K7 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Smim1P0C8K7 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Smim1P0C8K7 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Smim1P0C8K7 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Smim1P0C8K7 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Smim1P0C8K7 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Smim1P0C8K7 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Smim1P0C8K7 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Smim1P0C8K7 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Smim1P0C8K7 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Smim1P0C8K7 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Smim1P0C8K7 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Smim1P0C8K7 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Smim1P0C8K7 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Smim1P0C8K7 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Smim1P0C8K7 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Smim1P0C8K7 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Smim1P0C8K7 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Smim1P0C8K7 Rnf17-202ENSMUST00000223627 2077 ntBASIC9.67□□□□□ -0.86
Smim1P0C8K7 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Smim1P0C8K7 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Smim1P0C8K7 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Smim1P0C8K7 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Smim1P0C8K7 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Smim1P0C8K7 Gm715-201ENSMUST00000117865 831 ntBASIC9.67□□□□□ -0.86
Smim1P0C8K7 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC9.67□□□□□ -0.86
Smim1P0C8K7 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Smim1P0C8K7 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC9.67□□□□□ -0.86
Smim1P0C8K7 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC9.67□□□□□ -0.86
Smim1P0C8K7 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Smim1P0C8K7 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Smim1P0C8K7 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Smim1P0C8K7 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Smim1P0C8K7 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Smim1P0C8K7 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Smim1P0C8K7 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Smim1P0C8K7 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Smim1P0C8K7 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Smim1P0C8K7 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Smim1P0C8K7 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Smim1P0C8K7 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Smim1P0C8K7 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Smim1P0C8K7 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Smim1P0C8K7 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Smim1P0C8K7 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Smim1P0C8K7 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Smim1P0C8K7 Syt7-205ENSMUST00000224135 1557 ntBASIC9.67□□□□□ -0.86
Smim1P0C8K7 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Smim1P0C8K7 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Smim1P0C8K7 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Smim1P0C8K7 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Smim1P0C8K7 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC9.67□□□□□ -0.86
Smim1P0C8K7 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Smim1P0C8K7 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Smim1P0C8K7 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Smim1P0C8K7 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Smim1P0C8K7 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Smim1P0C8K7 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Smim1P0C8K7 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Smim1P0C8K7 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Smim1P0C8K7 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC9.66□□□□□ -0.86
Smim1P0C8K7 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Smim1P0C8K7 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Smim1P0C8K7 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Smim1P0C8K7 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC9.66□□□□□ -0.86
Smim1P0C8K7 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Smim1P0C8K7 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Smim1P0C8K7 Gm11860-201ENSMUST00000122346 1010 ntBASIC9.66□□□□□ -0.86
Smim1P0C8K7 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Smim1P0C8K7 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC9.66□□□□□ -0.86
Smim1P0C8K7 AC153881.1-201ENSMUST00000214448 284 ntBASIC9.66□□□□□ -0.86
Smim1P0C8K7 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms