Protein–RNA interactions for Protein: P0C6B2

Ptcra, Pre T-cell antigen receptor alpha, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PtcraP0C6B2 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
PtcraP0C6B2 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
PtcraP0C6B2 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC12.27□□□□□ -0.45
PtcraP0C6B2 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
PtcraP0C6B2 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
PtcraP0C6B2 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
PtcraP0C6B2 Gm45779-201ENSMUST00000212189 4064 ntBASIC12.27□□□□□ -0.45
PtcraP0C6B2 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
PtcraP0C6B2 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
PtcraP0C6B2 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
PtcraP0C6B2 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
PtcraP0C6B2 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
PtcraP0C6B2 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
PtcraP0C6B2 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
PtcraP0C6B2 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
PtcraP0C6B2 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
PtcraP0C6B2 Gm9347-201ENSMUST00000211473 1607 ntBASIC12.26□□□□□ -0.45
PtcraP0C6B2 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
PtcraP0C6B2 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
PtcraP0C6B2 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
PtcraP0C6B2 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
PtcraP0C6B2 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
PtcraP0C6B2 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
PtcraP0C6B2 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
PtcraP0C6B2 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
PtcraP0C6B2 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC12.26□□□□□ -0.45
PtcraP0C6B2 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
PtcraP0C6B2 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
PtcraP0C6B2 Gm7820-201ENSMUST00000121012 1052 ntBASIC12.26□□□□□ -0.45
PtcraP0C6B2 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC12.26□□□□□ -0.45
PtcraP0C6B2 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
PtcraP0C6B2 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
PtcraP0C6B2 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
PtcraP0C6B2 Gm33320-201ENSMUST00000192232 530 ntBASIC12.26□□□□□ -0.45
PtcraP0C6B2 Gm6916-202ENSMUST00000205523 195 ntBASIC12.26□□□□□ -0.45
PtcraP0C6B2 Gm18027-201ENSMUST00000218947 619 ntBASIC12.26□□□□□ -0.45
PtcraP0C6B2 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
PtcraP0C6B2 Shd-206ENSMUST00000225145 998 ntBASIC12.26□□□□□ -0.45
PtcraP0C6B2 AC149294.4-201ENSMUST00000227870 882 ntBASIC12.26□□□□□ -0.45
PtcraP0C6B2 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
PtcraP0C6B2 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
PtcraP0C6B2 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
PtcraP0C6B2 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
PtcraP0C6B2 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
PtcraP0C6B2 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
PtcraP0C6B2 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
PtcraP0C6B2 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
PtcraP0C6B2 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
PtcraP0C6B2 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
PtcraP0C6B2 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
PtcraP0C6B2 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
PtcraP0C6B2 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
PtcraP0C6B2 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
PtcraP0C6B2 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
PtcraP0C6B2 Nupl1-207ENSMUST00000225311 2475 ntBASIC12.26□□□□□ -0.45
PtcraP0C6B2 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC12.26□□□□□ -0.45
PtcraP0C6B2 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
PtcraP0C6B2 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
PtcraP0C6B2 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
PtcraP0C6B2 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
PtcraP0C6B2 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
PtcraP0C6B2 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
PtcraP0C6B2 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC12.25□□□□□ -0.45
PtcraP0C6B2 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
PtcraP0C6B2 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
PtcraP0C6B2 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
PtcraP0C6B2 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
PtcraP0C6B2 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
PtcraP0C6B2 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC12.25□□□□□ -0.45
PtcraP0C6B2 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC12.25□□□□□ -0.45
PtcraP0C6B2 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
PtcraP0C6B2 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
PtcraP0C6B2 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
PtcraP0C6B2 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
PtcraP0C6B2 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
PtcraP0C6B2 Gm13453-201ENSMUST00000118708 357 ntBASIC12.25□□□□□ -0.45
PtcraP0C6B2 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
PtcraP0C6B2 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC12.25□□□□□ -0.45
PtcraP0C6B2 Gm37714-201ENSMUST00000194742 342 ntBASIC12.25□□□□□ -0.45
PtcraP0C6B2 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
PtcraP0C6B2 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
PtcraP0C6B2 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
PtcraP0C6B2 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC12.25□□□□□ -0.45
PtcraP0C6B2 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
PtcraP0C6B2 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
PtcraP0C6B2 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
PtcraP0C6B2 Gm45667-201ENSMUST00000210380 1316 ntBASIC12.25□□□□□ -0.45
PtcraP0C6B2 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
PtcraP0C6B2 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
PtcraP0C6B2 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
PtcraP0C6B2 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
PtcraP0C6B2 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
PtcraP0C6B2 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
PtcraP0C6B2 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
PtcraP0C6B2 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
PtcraP0C6B2 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
PtcraP0C6B2 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
PtcraP0C6B2 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
PtcraP0C6B2 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
PtcraP0C6B2 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms