Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
NclP09405 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NclP09405 Gm18027-201ENSMUST00000218947 619 ntBASIC20.9■□□□□ 0.94
NclP09405 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NclP09405 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NclP09405 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
NclP09405 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
NclP09405 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
NclP09405 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
NclP09405 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
NclP09405 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC20.89■□□□□ 0.94
NclP09405 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC20.89■□□□□ 0.93
NclP09405 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC20.89■□□□□ 0.93
NclP09405 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NclP09405 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NclP09405 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NclP09405 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
NclP09405 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
NclP09405 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
NclP09405 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
NclP09405 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
NclP09405 AC155286.1-201ENSMUST00000218632 448 ntBASIC20.89■□□□□ 0.93
NclP09405 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC20.89■□□□□ 0.93
NclP09405 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NclP09405 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
NclP09405 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NclP09405 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
NclP09405 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC20.89■□□□□ 0.93
NclP09405 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
NclP09405 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC20.89■□□□□ 0.93
NclP09405 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC20.89■□□□□ 0.93
NclP09405 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NclP09405 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NclP09405 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
NclP09405 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NclP09405 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
NclP09405 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
NclP09405 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NclP09405 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NclP09405 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NclP09405 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NclP09405 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
NclP09405 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
NclP09405 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NclP09405 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NclP09405 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NclP09405 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NclP09405 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
NclP09405 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NclP09405 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NclP09405 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC20.88■□□□□ 0.93
NclP09405 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC20.88■□□□□ 0.93
NclP09405 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC20.88■□□□□ 0.93
NclP09405 Gm17795-201ENSMUST00000214505 757 ntBASIC20.88■□□□□ 0.93
NclP09405 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NclP09405 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NclP09405 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NclP09405 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
NclP09405 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NclP09405 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NclP09405 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
NclP09405 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NclP09405 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NclP09405 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
NclP09405 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
NclP09405 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC20.87■□□□□ 0.93
NclP09405 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC20.87■□□□□ 0.93
NclP09405 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC20.87■□□□□ 0.93
NclP09405 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NclP09405 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NclP09405 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NclP09405 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
NclP09405 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
NclP09405 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NclP09405 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
NclP09405 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
NclP09405 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
NclP09405 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
NclP09405 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NclP09405 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NclP09405 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NclP09405 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NclP09405 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
NclP09405 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
NclP09405 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC20.86■□□□□ 0.93
NclP09405 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
NclP09405 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC20.86■□□□□ 0.93
NclP09405 Gm15163-201ENSMUST00000120749 1302 ntBASIC20.86■□□□□ 0.93
NclP09405 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
NclP09405 Gm42690-201ENSMUST00000197921 1836 ntBASIC20.86■□□□□ 0.93
NclP09405 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NclP09405 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NclP09405 Gm6912-201ENSMUST00000117218 544 ntBASIC20.86■□□□□ 0.93
NclP09405 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NclP09405 Gm12138-201ENSMUST00000122180 951 ntBASIC20.86■□□□□ 0.93
NclP09405 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
NclP09405 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC20.86■□□□□ 0.93
NclP09405 Gm5279-201ENSMUST00000199575 745 ntBASIC20.86■□□□□ 0.93
NclP09405 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC20.86■□□□□ 0.93
NclP09405 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms