Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Gm45504-201ENSMUST00000211407 2107 ntBASIC14.95□□□□□ -0.02
TnfP06804 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
TnfP06804 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TnfP06804 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
TnfP06804 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
TnfP06804 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TnfP06804 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC14.94□□□□□ -0.02
TnfP06804 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TnfP06804 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
TnfP06804 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
TnfP06804 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TnfP06804 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TnfP06804 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TnfP06804 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
TnfP06804 Gm6912-201ENSMUST00000117218 544 ntBASIC14.94□□□□□ -0.02
TnfP06804 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TnfP06804 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
TnfP06804 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC14.94□□□□□ -0.02
TnfP06804 Ighv1-51-201ENSMUST00000192903 354 ntBASIC14.94□□□□□ -0.02
TnfP06804 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
TnfP06804 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
TnfP06804 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TnfP06804 Gm9347-201ENSMUST00000211473 1607 ntBASIC14.94□□□□□ -0.02
TnfP06804 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TnfP06804 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC14.94□□□□□ -0.02
TnfP06804 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
TnfP06804 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TnfP06804 Gm9115-201ENSMUST00000120192 1348 ntBASIC14.93□□□□□ -0.02
TnfP06804 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
TnfP06804 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
TnfP06804 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC14.93□□□□□ -0.02
TnfP06804 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TnfP06804 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
TnfP06804 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TnfP06804 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TnfP06804 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TnfP06804 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TnfP06804 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TnfP06804 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
TnfP06804 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TnfP06804 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC14.93□□□□□ -0.02
TnfP06804 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TnfP06804 Gm11557-201ENSMUST00000120200 1008 ntBASIC14.93□□□□□ -0.02
TnfP06804 Gm8927-201ENSMUST00000181978 981 ntBASIC14.93□□□□□ -0.02
TnfP06804 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
TnfP06804 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TnfP06804 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TnfP06804 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC14.93□□□□□ -0.02
TnfP06804 Gm3222-201ENSMUST00000071282 990 ntBASIC14.93□□□□□ -0.02
TnfP06804 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
TnfP06804 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
TnfP06804 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
TnfP06804 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TnfP06804 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TnfP06804 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TnfP06804 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TnfP06804 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TnfP06804 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TnfP06804 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
TnfP06804 AC126549.2-201ENSMUST00000223997 1976 ntBASIC14.93□□□□□ -0.02
TnfP06804 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TnfP06804 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TnfP06804 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TnfP06804 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
TnfP06804 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TnfP06804 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TnfP06804 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TnfP06804 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TnfP06804 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TnfP06804 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
TnfP06804 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TnfP06804 Gm15240-201ENSMUST00000118156 720 ntBASIC14.92□□□□□ -0.02
TnfP06804 Gm13385-201ENSMUST00000121089 220 ntBASIC14.92□□□□□ -0.02
TnfP06804 Gm12134-201ENSMUST00000122109 520 ntBASIC14.92□□□□□ -0.02
TnfP06804 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC14.92□□□□□ -0.02
TnfP06804 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC14.92□□□□□ -0.02
TnfP06804 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TnfP06804 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TnfP06804 Gm18905-201ENSMUST00000205454 928 ntBASIC14.92□□□□□ -0.02
TnfP06804 AC131690.1-201ENSMUST00000218406 374 ntBASIC14.92□□□□□ -0.02
TnfP06804 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC14.92□□□□□ -0.02
TnfP06804 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TnfP06804 Gm42471-201ENSMUST00000201457 1865 ntBASIC14.92□□□□□ -0.02
TnfP06804 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TnfP06804 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TnfP06804 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TnfP06804 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TnfP06804 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TnfP06804 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TnfP06804 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TnfP06804 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TnfP06804 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TnfP06804 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TnfP06804 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TnfP06804 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TnfP06804 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
TnfP06804 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TnfP06804 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
TnfP06804 Gm12620-201ENSMUST00000119791 1986 ntBASIC14.91□□□□□ -0.02
TnfP06804 Gm12612-201ENSMUST00000140182 1986 ntBASIC14.91□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms