Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hoxa3P02831 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC11.85□□□□□ -0.51
Hoxa3P02831 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hoxa3P02831 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Hoxa3P02831 Gm46209-201ENSMUST00000217912 553 ntBASIC11.85□□□□□ -0.51
Hoxa3P02831 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hoxa3P02831 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hoxa3P02831 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC11.85□□□□□ -0.51
Hoxa3P02831 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hoxa3P02831 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hoxa3P02831 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hoxa3P02831 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Hoxa3P02831 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hoxa3P02831 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC11.85□□□□□ -0.51
Hoxa3P02831 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Hoxa3P02831 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Hoxa3P02831 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hoxa3P02831 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Hoxa3P02831 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Hoxa3P02831 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hoxa3P02831 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hoxa3P02831 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hoxa3P02831 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Hoxa3P02831 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hoxa3P02831 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hoxa3P02831 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Hoxa3P02831 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hoxa3P02831 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Hoxa3P02831 Syt7-204ENSMUST00000223586 1344 ntBASIC11.85□□□□□ -0.51
Hoxa3P02831 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hoxa3P02831 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hoxa3P02831 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hoxa3P02831 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Hoxa3P02831 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hoxa3P02831 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hoxa3P02831 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hoxa3P02831 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Hoxa3P02831 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Hoxa3P02831 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
Hoxa3P02831 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hoxa3P02831 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Hoxa3P02831 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hoxa3P02831 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Hoxa3P02831 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hoxa3P02831 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Hoxa3P02831 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hoxa3P02831 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hoxa3P02831 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Hoxa3P02831 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Hoxa3P02831 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Hoxa3P02831 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC11.84□□□□□ -0.51
Hoxa3P02831 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Hoxa3P02831 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Hoxa3P02831 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Hoxa3P02831 Gm16215-201ENSMUST00000161990 637 ntBASIC11.84□□□□□ -0.51
Hoxa3P02831 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hoxa3P02831 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Hoxa3P02831 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hoxa3P02831 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Hoxa3P02831 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Hoxa3P02831 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hoxa3P02831 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Hoxa3P02831 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hoxa3P02831 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC11.84□□□□□ -0.51
Hoxa3P02831 Gm43205-201ENSMUST00000198622 1968 ntBASIC11.84□□□□□ -0.51
Hoxa3P02831 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hoxa3P02831 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Hoxa3P02831 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Hoxa3P02831 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Hoxa3P02831 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hoxa3P02831 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC11.84□□□□□ -0.51
Hoxa3P02831 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Hoxa3P02831 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hoxa3P02831 Gm6263-201ENSMUST00000120029 1342 ntBASIC11.84□□□□□ -0.51
Hoxa3P02831 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hoxa3P02831 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hoxa3P02831 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.51
Hoxa3P02831 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Hoxa3P02831 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.51
Hoxa3P02831 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Hoxa3P02831 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxa3P02831 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxa3P02831 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC11.83□□□□□ -0.52
Hoxa3P02831 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxa3P02831 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxa3P02831 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxa3P02831 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Hoxa3P02831 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxa3P02831 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxa3P02831 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxa3P02831 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxa3P02831 Ksr1-207ENSMUST00000226282 5260 ntBASIC11.83□□□□□ -0.52
Hoxa3P02831 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Hoxa3P02831 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Hoxa3P02831 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxa3P02831 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxa3P02831 Gm15321-201ENSMUST00000121290 288 ntBASIC11.83□□□□□ -0.52
Hoxa3P02831 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC11.83□□□□□ -0.52
Hoxa3P02831 Gm23547-201ENSMUST00000158210 271 ntBASIC11.83□□□□□ -0.52
Hoxa3P02831 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms