Protein–RNA interactions for Protein: P02301

H3f3c, Histone H3.3C, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3cP02301 Gm5779-201ENSMUST00000218467 910 ntBASIC12.14□□□□□ -0.47
H3f3cP02301 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
H3f3cP02301 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC12.14□□□□□ -0.47
H3f3cP02301 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
H3f3cP02301 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
H3f3cP02301 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
H3f3cP02301 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
H3f3cP02301 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
H3f3cP02301 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
H3f3cP02301 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
H3f3cP02301 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
H3f3cP02301 AC162938.1-201ENSMUST00000213140 2323 ntBASIC12.14□□□□□ -0.47
H3f3cP02301 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
H3f3cP02301 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
H3f3cP02301 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
H3f3cP02301 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
H3f3cP02301 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
H3f3cP02301 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
H3f3cP02301 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
H3f3cP02301 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
H3f3cP02301 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
H3f3cP02301 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
H3f3cP02301 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
H3f3cP02301 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
H3f3cP02301 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
H3f3cP02301 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
H3f3cP02301 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
H3f3cP02301 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
H3f3cP02301 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC12.13□□□□□ -0.47
H3f3cP02301 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
H3f3cP02301 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
H3f3cP02301 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC12.13□□□□□ -0.47
H3f3cP02301 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC12.13□□□□□ -0.47
H3f3cP02301 AC124732.2-201ENSMUST00000221977 316 ntBASIC12.13□□□□□ -0.47
H3f3cP02301 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
H3f3cP02301 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
H3f3cP02301 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
H3f3cP02301 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
H3f3cP02301 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
H3f3cP02301 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
H3f3cP02301 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC12.13□□□□□ -0.47
H3f3cP02301 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
H3f3cP02301 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
H3f3cP02301 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
H3f3cP02301 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
H3f3cP02301 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC12.13□□□□□ -0.47
H3f3cP02301 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
H3f3cP02301 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
H3f3cP02301 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
H3f3cP02301 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC12.13□□□□□ -0.47
H3f3cP02301 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
H3f3cP02301 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
H3f3cP02301 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
H3f3cP02301 Gm13517-201ENSMUST00000120782 1495 ntBASIC12.13□□□□□ -0.47
H3f3cP02301 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
H3f3cP02301 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
H3f3cP02301 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
H3f3cP02301 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC12.13□□□□□ -0.47
H3f3cP02301 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
H3f3cP02301 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
H3f3cP02301 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
H3f3cP02301 Fgf17-202ENSMUST00000227123 1336 ntBASIC12.12□□□□□ -0.47
H3f3cP02301 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
H3f3cP02301 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
H3f3cP02301 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
H3f3cP02301 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
H3f3cP02301 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
H3f3cP02301 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
H3f3cP02301 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
H3f3cP02301 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
H3f3cP02301 Gm5763-201ENSMUST00000155951 1530 ntBASIC12.12□□□□□ -0.47
H3f3cP02301 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
H3f3cP02301 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
H3f3cP02301 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
H3f3cP02301 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
H3f3cP02301 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
H3f3cP02301 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
H3f3cP02301 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
H3f3cP02301 Gm6415-201ENSMUST00000118488 348 ntBASIC12.12□□□□□ -0.47
H3f3cP02301 Gm12882-201ENSMUST00000121696 517 ntBASIC12.12□□□□□ -0.47
H3f3cP02301 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC12.12□□□□□ -0.47
H3f3cP02301 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
H3f3cP02301 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
H3f3cP02301 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
H3f3cP02301 Gm25948-201ENSMUST00000175334 112 ntBASIC12.12□□□□□ -0.47
H3f3cP02301 Gm27430-201ENSMUST00000184585 107 ntBASIC12.12□□□□□ -0.47
H3f3cP02301 Gm44333-201ENSMUST00000197168 107 ntBASIC12.12□□□□□ -0.47
H3f3cP02301 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
H3f3cP02301 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
H3f3cP02301 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
H3f3cP02301 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
H3f3cP02301 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
H3f3cP02301 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
H3f3cP02301 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
H3f3cP02301 AC121805.2-201ENSMUST00000218808 2538 ntBASIC12.12□□□□□ -0.47
H3f3cP02301 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
H3f3cP02301 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
H3f3cP02301 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
H3f3cP02301 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
H3f3cP02301 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 78.5 ms