Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC13.03□□□□□ -0.32
Cops4O88544 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Cops4O88544 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cops4O88544 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cops4O88544 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cops4O88544 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cops4O88544 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC13.03□□□□□ -0.32
Cops4O88544 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC13.03□□□□□ -0.32
Cops4O88544 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cops4O88544 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cops4O88544 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Cops4O88544 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cops4O88544 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cops4O88544 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cops4O88544 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cops4O88544 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC13.03□□□□□ -0.32
Cops4O88544 Olfr286-202ENSMUST00000205305 969 ntBASIC13.03□□□□□ -0.32
Cops4O88544 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cops4O88544 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cops4O88544 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cops4O88544 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cops4O88544 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cops4O88544 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cops4O88544 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cops4O88544 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Cops4O88544 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cops4O88544 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Cops4O88544 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cops4O88544 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cops4O88544 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cops4O88544 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC13.03□□□□□ -0.32
Cops4O88544 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
Cops4O88544 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cops4O88544 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cops4O88544 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cops4O88544 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cops4O88544 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Cops4O88544 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Cops4O88544 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cops4O88544 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cops4O88544 Gm9252-201ENSMUST00000172364 1602 ntBASIC13.02□□□□□ -0.32
Cops4O88544 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Cops4O88544 Gm37644-201ENSMUST00000192190 2270 ntBASIC13.02□□□□□ -0.32
Cops4O88544 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC13.02□□□□□ -0.32
Cops4O88544 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cops4O88544 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Cops4O88544 Tcf21-202ENSMUST00000218002 1788 ntBASIC13.02□□□□□ -0.32
Cops4O88544 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cops4O88544 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cops4O88544 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cops4O88544 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cops4O88544 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cops4O88544 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Cops4O88544 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC13.02□□□□□ -0.33
Cops4O88544 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC13.02□□□□□ -0.33
Cops4O88544 Gm18195-201ENSMUST00000207604 706 ntBASIC13.02□□□□□ -0.33
Cops4O88544 Gm18041-201ENSMUST00000218210 618 ntBASIC13.02□□□□□ -0.33
Cops4O88544 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cops4O88544 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cops4O88544 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cops4O88544 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cops4O88544 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC13.02□□□□□ -0.33
Cops4O88544 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cops4O88544 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cops4O88544 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Cops4O88544 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cops4O88544 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Cops4O88544 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cops4O88544 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cops4O88544 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cops4O88544 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cops4O88544 AC154262.2-201ENSMUST00000224310 2293 ntBASIC13.01□□□□□ -0.33
Cops4O88544 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Cops4O88544 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cops4O88544 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Cops4O88544 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cops4O88544 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cops4O88544 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Cops4O88544 Gm13036-201ENSMUST00000117799 748 ntBASIC13.01□□□□□ -0.33
Cops4O88544 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cops4O88544 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cops4O88544 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cops4O88544 Gm4691-201ENSMUST00000182339 1000 ntBASIC13.01□□□□□ -0.33
Cops4O88544 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC13.01□□□□□ -0.33
Cops4O88544 Gm2451-201ENSMUST00000199447 999 ntBASIC13.01□□□□□ -0.33
Cops4O88544 Gm10290-201ENSMUST00000200451 999 ntBASIC13.01□□□□□ -0.33
Cops4O88544 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC13.01□□□□□ -0.33
Cops4O88544 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC13.01□□□□□ -0.33
Cops4O88544 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cops4O88544 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC13.01□□□□□ -0.33
Cops4O88544 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Cops4O88544 Gm5366-201ENSMUST00000215494 1338 ntBASIC13.01□□□□□ -0.33
Cops4O88544 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cops4O88544 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cops4O88544 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cops4O88544 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Cops4O88544 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cops4O88544 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cops4O88544 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cops4O88544 Gm14371-201ENSMUST00000138925 1518 ntBASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms