Protein–RNA interactions for Protein: O88472

Tnfrsf17, Tumor necrosis factor receptor superfamily member 17, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf17O88472 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tnfrsf17O88472 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tnfrsf17O88472 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tnfrsf17O88472 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC13.05□□□□□ -0.32
Tnfrsf17O88472 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tnfrsf17O88472 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tnfrsf17O88472 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC13.05□□□□□ -0.32
Tnfrsf17O88472 Gm12882-201ENSMUST00000121696 517 ntBASIC13.05□□□□□ -0.32
Tnfrsf17O88472 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Tnfrsf17O88472 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tnfrsf17O88472 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Tnfrsf17O88472 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Tnfrsf17O88472 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC13.05□□□□□ -0.32
Tnfrsf17O88472 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC13.05□□□□□ -0.32
Tnfrsf17O88472 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC13.05□□□□□ -0.32
Tnfrsf17O88472 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Tnfrsf17O88472 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC13.05□□□□□ -0.32
Tnfrsf17O88472 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Tnfrsf17O88472 Gm18473-201ENSMUST00000220543 868 ntBASIC13.05□□□□□ -0.32
Tnfrsf17O88472 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC13.05□□□□□ -0.32
Tnfrsf17O88472 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC13.05□□□□□ -0.32
Tnfrsf17O88472 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tnfrsf17O88472 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Tnfrsf17O88472 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tnfrsf17O88472 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tnfrsf17O88472 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tnfrsf17O88472 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tnfrsf17O88472 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tnfrsf17O88472 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tnfrsf17O88472 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tnfrsf17O88472 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tnfrsf17O88472 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tnfrsf17O88472 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tnfrsf17O88472 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tnfrsf17O88472 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Tnfrsf17O88472 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tnfrsf17O88472 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tnfrsf17O88472 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tnfrsf17O88472 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tnfrsf17O88472 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tnfrsf17O88472 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tnfrsf17O88472 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tnfrsf17O88472 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Tnfrsf17O88472 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Tnfrsf17O88472 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Tnfrsf17O88472 AC093043.3-201ENSMUST00000226531 2273 ntBASIC13.04□□□□□ -0.32
Tnfrsf17O88472 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Tnfrsf17O88472 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tnfrsf17O88472 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tnfrsf17O88472 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tnfrsf17O88472 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Tnfrsf17O88472 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC13.04□□□□□ -0.32
Tnfrsf17O88472 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tnfrsf17O88472 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC13.04□□□□□ -0.32
Tnfrsf17O88472 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC13.04□□□□□ -0.32
Tnfrsf17O88472 Gm7895-201ENSMUST00000187459 1173 ntBASIC13.04□□□□□ -0.32
Tnfrsf17O88472 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Tnfrsf17O88472 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Tnfrsf17O88472 Gm5069-202ENSMUST00000192714 1011 ntBASIC13.04□□□□□ -0.32
Tnfrsf17O88472 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Tnfrsf17O88472 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Tnfrsf17O88472 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC13.04□□□□□ -0.32
Tnfrsf17O88472 AC166997.1-201ENSMUST00000225122 572 ntBASIC13.04□□□□□ -0.32
Tnfrsf17O88472 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tnfrsf17O88472 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tnfrsf17O88472 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Tnfrsf17O88472 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tnfrsf17O88472 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tnfrsf17O88472 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tnfrsf17O88472 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tnfrsf17O88472 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tnfrsf17O88472 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tnfrsf17O88472 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC13.04□□□□□ -0.32
Tnfrsf17O88472 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tnfrsf17O88472 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Tnfrsf17O88472 Gm44207-201ENSMUST00000204568 1424 ntBASIC13.04□□□□□ -0.32
Tnfrsf17O88472 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tnfrsf17O88472 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC13.04□□□□□ -0.32
Tnfrsf17O88472 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tnfrsf17O88472 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tnfrsf17O88472 Gm43195-201ENSMUST00000200614 2332 ntBASIC13.04□□□□□ -0.32
Tnfrsf17O88472 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tnfrsf17O88472 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tnfrsf17O88472 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tnfrsf17O88472 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC13.03□□□□□ -0.32
Tnfrsf17O88472 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tnfrsf17O88472 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tnfrsf17O88472 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Tnfrsf17O88472 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tnfrsf17O88472 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tnfrsf17O88472 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tnfrsf17O88472 Gm13461-201ENSMUST00000120980 662 ntBASIC13.03□□□□□ -0.32
Tnfrsf17O88472 Proscos-202ENSMUST00000178990 666 ntBASIC13.03□□□□□ -0.32
Tnfrsf17O88472 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Tnfrsf17O88472 Gm38223-201ENSMUST00000194484 695 ntBASIC13.03□□□□□ -0.32
Tnfrsf17O88472 Rps4l-202ENSMUST00000204242 789 ntBASIC13.03□□□□□ -0.32
Tnfrsf17O88472 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
Tnfrsf17O88472 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Tnfrsf17O88472 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tnfrsf17O88472 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms