Protein–RNA interactions for Protein: O88384

Vti1b, Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1bO88384 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Vti1bO88384 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vti1bO88384 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vti1bO88384 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC13.47□□□□□ -0.25
Vti1bO88384 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC13.47□□□□□ -0.25
Vti1bO88384 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC13.47□□□□□ -0.25
Vti1bO88384 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC13.47□□□□□ -0.25
Vti1bO88384 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC13.47□□□□□ -0.25
Vti1bO88384 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Vti1bO88384 AC155729.1-201ENSMUST00000227758 544 ntBASIC13.47□□□□□ -0.25
Vti1bO88384 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vti1bO88384 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vti1bO88384 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Vti1bO88384 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vti1bO88384 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vti1bO88384 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vti1bO88384 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vti1bO88384 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vti1bO88384 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Vti1bO88384 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vti1bO88384 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vti1bO88384 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vti1bO88384 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vti1bO88384 Gm13233-201ENSMUST00000118760 1443 ntBASIC13.47□□□□□ -0.25
Vti1bO88384 Gm13244-201ENSMUST00000118855 1446 ntBASIC13.47□□□□□ -0.25
Vti1bO88384 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vti1bO88384 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Vti1bO88384 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vti1bO88384 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vti1bO88384 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vti1bO88384 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vti1bO88384 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vti1bO88384 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vti1bO88384 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vti1bO88384 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
Vti1bO88384 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vti1bO88384 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vti1bO88384 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vti1bO88384 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vti1bO88384 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vti1bO88384 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vti1bO88384 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vti1bO88384 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC13.46□□□□□ -0.25
Vti1bO88384 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC13.46□□□□□ -0.25
Vti1bO88384 Gm11025-201ENSMUST00000140773 466 ntBASIC13.46□□□□□ -0.25
Vti1bO88384 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC13.46□□□□□ -0.25
Vti1bO88384 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC13.46□□□□□ -0.25
Vti1bO88384 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC13.46□□□□□ -0.25
Vti1bO88384 Gm45612-201ENSMUST00000211320 160 ntBASIC13.46□□□□□ -0.25
Vti1bO88384 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vti1bO88384 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vti1bO88384 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vti1bO88384 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Vti1bO88384 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Vti1bO88384 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vti1bO88384 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vti1bO88384 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC13.46□□□□□ -0.25
Vti1bO88384 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Vti1bO88384 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vti1bO88384 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
Vti1bO88384 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.26
Vti1bO88384 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Vti1bO88384 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Vti1bO88384 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Vti1bO88384 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vti1bO88384 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Vti1bO88384 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vti1bO88384 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Vti1bO88384 Gm30238-201ENSMUST00000195528 2603 ntBASIC13.45□□□□□ -0.26
Vti1bO88384 CT025610.1-201ENSMUST00000224552 1786 ntBASIC13.45□□□□□ -0.26
Vti1bO88384 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vti1bO88384 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vti1bO88384 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vti1bO88384 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vti1bO88384 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vti1bO88384 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC13.45□□□□□ -0.26
Vti1bO88384 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC13.45□□□□□ -0.26
Vti1bO88384 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vti1bO88384 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vti1bO88384 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vti1bO88384 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vti1bO88384 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vti1bO88384 Gm8749-201ENSMUST00000117737 331 ntBASIC13.45□□□□□ -0.26
Vti1bO88384 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Vti1bO88384 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vti1bO88384 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Vti1bO88384 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC13.45□□□□□ -0.26
Vti1bO88384 AC225888.1-201ENSMUST00000227184 728 ntBASIC13.45□□□□□ -0.26
Vti1bO88384 CT030684.1-201ENSMUST00000227292 914 ntBASIC13.45□□□□□ -0.26
Vti1bO88384 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vti1bO88384 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Vti1bO88384 Gpr146-202ENSMUST00000053120 1040 ntBASIC13.45□□□□□ -0.26
Vti1bO88384 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vti1bO88384 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Vti1bO88384 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Vti1bO88384 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vti1bO88384 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Vti1bO88384 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Vti1bO88384 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vti1bO88384 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms