Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pdlim1O70400 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pdlim1O70400 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Pdlim1O70400 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pdlim1O70400 Gm45003-201ENSMUST00000205875 2158 ntBASIC13.95□□□□□ -0.18
Pdlim1O70400 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pdlim1O70400 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Pdlim1O70400 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pdlim1O70400 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pdlim1O70400 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Pdlim1O70400 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pdlim1O70400 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC13.94□□□□□ -0.18
Pdlim1O70400 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pdlim1O70400 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Pdlim1O70400 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pdlim1O70400 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Pdlim1O70400 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Pdlim1O70400 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pdlim1O70400 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pdlim1O70400 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Pdlim1O70400 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pdlim1O70400 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Pdlim1O70400 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Pdlim1O70400 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC13.94□□□□□ -0.18
Pdlim1O70400 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Pdlim1O70400 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Pdlim1O70400 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pdlim1O70400 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
Pdlim1O70400 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Pdlim1O70400 Cd63-ps-201ENSMUST00000145417 875 ntBASIC13.94□□□□□ -0.18
Pdlim1O70400 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Pdlim1O70400 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pdlim1O70400 Gm4804-201ENSMUST00000182234 999 ntBASIC13.94□□□□□ -0.18
Pdlim1O70400 Gm27989-201ENSMUST00000184721 107 ntBASIC13.94□□□□□ -0.18
Pdlim1O70400 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC13.94□□□□□ -0.18
Pdlim1O70400 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Pdlim1O70400 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pdlim1O70400 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Pdlim1O70400 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pdlim1O70400 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Pdlim1O70400 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pdlim1O70400 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Pdlim1O70400 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Pdlim1O70400 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pdlim1O70400 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Pdlim1O70400 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Pdlim1O70400 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Pdlim1O70400 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pdlim1O70400 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pdlim1O70400 Gm9347-201ENSMUST00000211473 1607 ntBASIC13.93□□□□□ -0.18
Pdlim1O70400 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pdlim1O70400 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pdlim1O70400 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC13.93□□□□□ -0.18
Pdlim1O70400 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Pdlim1O70400 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Pdlim1O70400 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Pdlim1O70400 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pdlim1O70400 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC13.93□□□□□ -0.18
Pdlim1O70400 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pdlim1O70400 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Pdlim1O70400 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pdlim1O70400 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pdlim1O70400 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pdlim1O70400 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pdlim1O70400 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pdlim1O70400 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Pdlim1O70400 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pdlim1O70400 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC13.93□□□□□ -0.18
Pdlim1O70400 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pdlim1O70400 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pdlim1O70400 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC13.93□□□□□ -0.18
Pdlim1O70400 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC13.93□□□□□ -0.18
Pdlim1O70400 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC13.93□□□□□ -0.18
Pdlim1O70400 Gm21470-201ENSMUST00000187680 696 ntBASIC13.93□□□□□ -0.18
Pdlim1O70400 Gm5425-201ENSMUST00000214125 459 ntBASIC13.93□□□□□ -0.18
Pdlim1O70400 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pdlim1O70400 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Pdlim1O70400 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pdlim1O70400 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pdlim1O70400 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pdlim1O70400 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pdlim1O70400 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC13.93□□□□□ -0.18
Pdlim1O70400 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Pdlim1O70400 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Pdlim1O70400 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pdlim1O70400 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Pdlim1O70400 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Pdlim1O70400 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC13.92□□□□□ -0.18
Pdlim1O70400 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pdlim1O70400 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pdlim1O70400 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Pdlim1O70400 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC13.92□□□□□ -0.18
Pdlim1O70400 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pdlim1O70400 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pdlim1O70400 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pdlim1O70400 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC13.92□□□□□ -0.18
Pdlim1O70400 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pdlim1O70400 Gm4204-201ENSMUST00000110798 1231 ntBASIC13.92□□□□□ -0.18
Pdlim1O70400 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pdlim1O70400 Gm6283-201ENSMUST00000182369 1000 ntBASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms