Protein–RNA interactions for Protein: O70174

Chrna4, Neuronal acetylcholine receptor subunit alpha-4, mousemouse

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna4O70174 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Chrna4O70174 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC14.25□□□□□ -0.13
Chrna4O70174 AA543401-201ENSMUST00000164248 1269 ntBASIC14.25□□□□□ -0.13
Chrna4O70174 Gm27618-201ENSMUST00000183671 60 ntBASIC14.25□□□□□ -0.13
Chrna4O70174 Gm27533-201ENSMUST00000183800 152 ntBASIC14.25□□□□□ -0.13
Chrna4O70174 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chrna4O70174 Gm44608-201ENSMUST00000206827 855 ntBASIC14.25□□□□□ -0.13
Chrna4O70174 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chrna4O70174 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Chrna4O70174 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Chrna4O70174 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Chrna4O70174 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
Chrna4O70174 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chrna4O70174 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chrna4O70174 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Chrna4O70174 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chrna4O70174 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Chrna4O70174 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Chrna4O70174 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chrna4O70174 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chrna4O70174 Gm38391-201ENSMUST00000191720 4069 ntBASIC14.25□□□□□ -0.13
Chrna4O70174 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chrna4O70174 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Chrna4O70174 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chrna4O70174 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chrna4O70174 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC14.24□□□□□ -0.13
Chrna4O70174 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chrna4O70174 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Chrna4O70174 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC14.24□□□□□ -0.13
Chrna4O70174 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Chrna4O70174 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Chrna4O70174 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Chrna4O70174 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC14.24□□□□□ -0.13
Chrna4O70174 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Chrna4O70174 Ighv8-14-201ENSMUST00000196781 358 ntBASIC14.24□□□□□ -0.13
Chrna4O70174 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC14.24□□□□□ -0.13
Chrna4O70174 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Chrna4O70174 AC139382.1-201ENSMUST00000221402 498 ntBASIC14.24□□□□□ -0.13
Chrna4O70174 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chrna4O70174 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chrna4O70174 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chrna4O70174 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chrna4O70174 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chrna4O70174 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chrna4O70174 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Chrna4O70174 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
Chrna4O70174 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC14.24□□□□□ -0.13
Chrna4O70174 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC14.24□□□□□ -0.13
Chrna4O70174 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chrna4O70174 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chrna4O70174 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC14.24□□□□□ -0.13
Chrna4O70174 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chrna4O70174 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chrna4O70174 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chrna4O70174 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chrna4O70174 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chrna4O70174 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chrna4O70174 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chrna4O70174 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chrna4O70174 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Chrna4O70174 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chrna4O70174 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chrna4O70174 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chrna4O70174 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chrna4O70174 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chrna4O70174 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC14.23□□□□□ -0.13
Chrna4O70174 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chrna4O70174 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Chrna4O70174 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Chrna4O70174 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Chrna4O70174 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Chrna4O70174 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC14.23□□□□□ -0.13
Chrna4O70174 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chrna4O70174 Gm27430-201ENSMUST00000184585 107 ntBASIC14.23□□□□□ -0.13
Chrna4O70174 Gm44333-201ENSMUST00000197168 107 ntBASIC14.23□□□□□ -0.13
Chrna4O70174 Gm6916-202ENSMUST00000205523 195 ntBASIC14.23□□□□□ -0.13
Chrna4O70174 AC124732.2-201ENSMUST00000221977 316 ntBASIC14.23□□□□□ -0.13
Chrna4O70174 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chrna4O70174 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chrna4O70174 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Chrna4O70174 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Chrna4O70174 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC14.23□□□□□ -0.13
Chrna4O70174 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chrna4O70174 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chrna4O70174 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chrna4O70174 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC14.23□□□□□ -0.13
Chrna4O70174 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chrna4O70174 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Chrna4O70174 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chrna4O70174 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chrna4O70174 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chrna4O70174 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chrna4O70174 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chrna4O70174 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Chrna4O70174 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Chrna4O70174 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Chrna4O70174 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chrna4O70174 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chrna4O70174 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Chrna4O70174 Gm12020-201ENSMUST00000119030 2042 ntBASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms