Protein–RNA interactions for Protein: O54785

Limk2, LIM domain kinase 2, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk2O54785 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Limk2O54785 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Limk2O54785 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Limk2O54785 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Limk2O54785 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Limk2O54785 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Limk2O54785 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Limk2O54785 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Limk2O54785 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Limk2O54785 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Limk2O54785 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Limk2O54785 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Limk2O54785 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Limk2O54785 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Limk2O54785 Gm15653-201ENSMUST00000119247 907 ntBASIC14.32□□□□□ -0.12
Limk2O54785 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Limk2O54785 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC14.32□□□□□ -0.12
Limk2O54785 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Limk2O54785 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Limk2O54785 Gm9794-201ENSMUST00000202370 423 ntBASIC14.32□□□□□ -0.12
Limk2O54785 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC14.32□□□□□ -0.12
Limk2O54785 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Limk2O54785 Shd-206ENSMUST00000225145 998 ntBASIC14.32□□□□□ -0.12
Limk2O54785 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC14.32□□□□□ -0.12
Limk2O54785 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Limk2O54785 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Limk2O54785 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Limk2O54785 AC126549.2-201ENSMUST00000223997 1976 ntBASIC14.32□□□□□ -0.12
Limk2O54785 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Limk2O54785 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Limk2O54785 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Limk2O54785 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC14.32□□□□□ -0.12
Limk2O54785 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Limk2O54785 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Limk2O54785 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Limk2O54785 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Limk2O54785 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC14.31□□□□□ -0.12
Limk2O54785 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Limk2O54785 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC14.31□□□□□ -0.12
Limk2O54785 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Limk2O54785 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Limk2O54785 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Limk2O54785 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Limk2O54785 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Limk2O54785 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.31□□□□□ -0.12
Limk2O54785 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Limk2O54785 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Limk2O54785 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Limk2O54785 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Limk2O54785 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Limk2O54785 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Limk2O54785 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Limk2O54785 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Limk2O54785 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Limk2O54785 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC14.31□□□□□ -0.12
Limk2O54785 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Limk2O54785 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Limk2O54785 Gm28631-201ENSMUST00000190740 334 ntBASIC14.31□□□□□ -0.12
Limk2O54785 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Limk2O54785 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Limk2O54785 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Limk2O54785 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Limk2O54785 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Limk2O54785 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Limk2O54785 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Limk2O54785 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Limk2O54785 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
Limk2O54785 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC14.31□□□□□ -0.12
Limk2O54785 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Limk2O54785 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Limk2O54785 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Limk2O54785 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Limk2O54785 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC14.3□□□□□ -0.12
Limk2O54785 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Limk2O54785 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Limk2O54785 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.3□□□□□ -0.12
Limk2O54785 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Limk2O54785 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC14.3□□□□□ -0.12
Limk2O54785 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Limk2O54785 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Limk2O54785 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Limk2O54785 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Limk2O54785 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Limk2O54785 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Limk2O54785 Mir1897-201ENSMUST00000122581 272 ntBASIC14.3□□□□□ -0.12
Limk2O54785 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Limk2O54785 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC14.3□□□□□ -0.12
Limk2O54785 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC14.3□□□□□ -0.12
Limk2O54785 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Limk2O54785 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Limk2O54785 AC139350.3-201ENSMUST00000226151 420 ntBASIC14.3□□□□□ -0.12
Limk2O54785 AC156016.3-201ENSMUST00000228623 344 ntBASIC14.3□□□□□ -0.12
Limk2O54785 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Limk2O54785 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Limk2O54785 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Limk2O54785 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Limk2O54785 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Limk2O54785 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC14.3□□□□□ -0.12
Limk2O54785 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Limk2O54785 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms