Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 CT030704.2-201ENSMUST00000228887 494 ntBASIC15.16■□□□□ 0.02
Nr1i3O35627 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC15.16■□□□□ 0.02
Nr1i3O35627 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC15.16■□□□□ 0.02
Nr1i3O35627 Gm5639-201ENSMUST00000122305 2403 ntBASIC15.16■□□□□ 0.02
Nr1i3O35627 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC15.16■□□□□ 0.02
Nr1i3O35627 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nr1i3O35627 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Nr1i3O35627 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nr1i3O35627 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nr1i3O35627 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Nr1i3O35627 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Nr1i3O35627 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nr1i3O35627 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nr1i3O35627 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Nr1i3O35627 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Nr1i3O35627 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nr1i3O35627 Gm13332-201ENSMUST00000120451 1398 ntBASIC15.15■□□□□ 0.02
Nr1i3O35627 Gm37691-201ENSMUST00000192147 2573 ntBASIC15.15■□□□□ 0.02
Nr1i3O35627 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nr1i3O35627 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Nr1i3O35627 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Nr1i3O35627 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nr1i3O35627 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Nr1i3O35627 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Nr1i3O35627 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nr1i3O35627 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nr1i3O35627 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC15.15■□□□□ 0.02
Nr1i3O35627 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Nr1i3O35627 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Nr1i3O35627 Gm5264-201ENSMUST00000190584 848 ntBASIC15.15■□□□□ 0.02
Nr1i3O35627 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC15.15■□□□□ 0.02
Nr1i3O35627 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC15.15■□□□□ 0.02
Nr1i3O35627 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Nr1i3O35627 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Nr1i3O35627 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Nr1i3O35627 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nr1i3O35627 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nr1i3O35627 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC15.15■□□□□ 0.02
Nr1i3O35627 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nr1i3O35627 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nr1i3O35627 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Nr1i3O35627 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nr1i3O35627 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC15.15■□□□□ 0.02
Nr1i3O35627 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nr1i3O35627 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nr1i3O35627 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nr1i3O35627 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC15.14■□□□□ 0.01
Nr1i3O35627 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
Nr1i3O35627 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Nr1i3O35627 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Nr1i3O35627 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC15.14■□□□□ 0.01
Nr1i3O35627 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Nr1i3O35627 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC15.14■□□□□ 0.01
Nr1i3O35627 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Nr1i3O35627 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Nr1i3O35627 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nr1i3O35627 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Nr1i3O35627 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC15.14■□□□□ 0.01
Nr1i3O35627 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Nr1i3O35627 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nr1i3O35627 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC15.14■□□□□ 0.01
Nr1i3O35627 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nr1i3O35627 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC15.14■□□□□ 0.01
Nr1i3O35627 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Nr1i3O35627 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nr1i3O35627 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC15.14■□□□□ 0.01
Nr1i3O35627 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Nr1i3O35627 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Nr1i3O35627 Gm25911-201ENSMUST00000157621 56 ntBASIC15.14■□□□□ 0.01
Nr1i3O35627 Gm27631-201ENSMUST00000184163 466 ntBASIC15.14■□□□□ 0.01
Nr1i3O35627 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nr1i3O35627 AC149588.3-201ENSMUST00000227515 150 ntBASIC15.14■□□□□ 0.01
Nr1i3O35627 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nr1i3O35627 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Nr1i3O35627 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nr1i3O35627 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nr1i3O35627 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Nr1i3O35627 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nr1i3O35627 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Nr1i3O35627 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC15.14■□□□□ 0.01
Nr1i3O35627 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nr1i3O35627 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Nr1i3O35627 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC15.14■□□□□ 0.01
Nr1i3O35627 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nr1i3O35627 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Nr1i3O35627 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nr1i3O35627 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nr1i3O35627 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
Nr1i3O35627 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nr1i3O35627 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Nr1i3O35627 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nr1i3O35627 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Nr1i3O35627 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nr1i3O35627 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Nr1i3O35627 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Nr1i3O35627 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nr1i3O35627 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Nr1i3O35627 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Nr1i3O35627 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nr1i3O35627 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms