Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Npc1O35604 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
Npc1O35604 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Npc1O35604 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Npc1O35604 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Npc1O35604 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Npc1O35604 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Npc1O35604 Gm12882-201ENSMUST00000121696 517 ntBASIC13.79□□□□□ -0.2
Npc1O35604 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Npc1O35604 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Npc1O35604 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC13.79□□□□□ -0.2
Npc1O35604 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Npc1O35604 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Npc1O35604 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Npc1O35604 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Npc1O35604 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Npc1O35604 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
Npc1O35604 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Npc1O35604 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC13.79□□□□□ -0.2
Npc1O35604 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
Npc1O35604 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Npc1O35604 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Npc1O35604 BC001981-202ENSMUST00000191393 1545 ntBASIC13.79□□□□□ -0.2
Npc1O35604 Gm5320-201ENSMUST00000207163 1519 ntBASIC13.79□□□□□ -0.2
Npc1O35604 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Npc1O35604 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Npc1O35604 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Npc1O35604 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Npc1O35604 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Npc1O35604 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Npc1O35604 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Npc1O35604 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC13.78□□□□□ -0.2
Npc1O35604 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Npc1O35604 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Npc1O35604 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC13.78□□□□□ -0.2
Npc1O35604 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Npc1O35604 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Npc1O35604 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC13.78□□□□□ -0.2
Npc1O35604 Wdyhv1-203ENSMUST00000226889 394 ntBASIC13.78□□□□□ -0.2
Npc1O35604 AC149588.3-201ENSMUST00000227515 150 ntBASIC13.78□□□□□ -0.2
Npc1O35604 AC155729.1-201ENSMUST00000227758 544 ntBASIC13.78□□□□□ -0.2
Npc1O35604 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Npc1O35604 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Npc1O35604 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Npc1O35604 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC13.78□□□□□ -0.2
Npc1O35604 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Npc1O35604 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Npc1O35604 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Npc1O35604 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Npc1O35604 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Npc1O35604 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Npc1O35604 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Npc1O35604 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Npc1O35604 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Npc1O35604 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Npc1O35604 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Npc1O35604 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Npc1O35604 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC13.78□□□□□ -0.2
Npc1O35604 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Npc1O35604 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Npc1O35604 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Npc1O35604 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Npc1O35604 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
Npc1O35604 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Npc1O35604 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Npc1O35604 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC13.77□□□□□ -0.21
Npc1O35604 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Npc1O35604 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Npc1O35604 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Npc1O35604 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Npc1O35604 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Npc1O35604 Mir6977-201ENSMUST00000184960 64 ntBASIC13.77□□□□□ -0.21
Npc1O35604 Gm7775-201ENSMUST00000218871 853 ntBASIC13.77□□□□□ -0.21
Npc1O35604 Gm9229-201ENSMUST00000222777 126 ntBASIC13.77□□□□□ -0.21
Npc1O35604 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Npc1O35604 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Npc1O35604 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Npc1O35604 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Npc1O35604 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Npc1O35604 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Npc1O35604 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Npc1O35604 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC13.77□□□□□ -0.21
Npc1O35604 Mir125a-201ENSMUST00000083545 68 ntBASIC13.77□□□□□ -0.21
Npc1O35604 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Npc1O35604 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Npc1O35604 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Npc1O35604 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Npc1O35604 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Npc1O35604 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Npc1O35604 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC13.76□□□□□ -0.21
Npc1O35604 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Npc1O35604 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Npc1O35604 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Npc1O35604 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Npc1O35604 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Npc1O35604 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Npc1O35604 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Npc1O35604 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Npc1O35604 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Npc1O35604 Gm14451-201ENSMUST00000121581 1542 ntBASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms