Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Efnb3O35393 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Efnb3O35393 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Efnb3O35393 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Efnb3O35393 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Efnb3O35393 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Efnb3O35393 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Efnb3O35393 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Efnb3O35393 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Efnb3O35393 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Efnb3O35393 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Efnb3O35393 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Efnb3O35393 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Efnb3O35393 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Efnb3O35393 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Efnb3O35393 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Efnb3O35393 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Efnb3O35393 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC11.16□□□□□ -0.62
Efnb3O35393 Gm6184-201ENSMUST00000120403 1261 ntBASIC11.16□□□□□ -0.62
Efnb3O35393 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Efnb3O35393 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Efnb3O35393 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Efnb3O35393 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Efnb3O35393 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Efnb3O35393 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Efnb3O35393 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Efnb3O35393 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Efnb3O35393 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Efnb3O35393 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Efnb3O35393 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Efnb3O35393 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Efnb3O35393 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Efnb3O35393 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC11.16□□□□□ -0.62
Efnb3O35393 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Efnb3O35393 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Efnb3O35393 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Efnb3O35393 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Efnb3O35393 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Efnb3O35393 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Efnb3O35393 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Efnb3O35393 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Efnb3O35393 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC11.16□□□□□ -0.62
Efnb3O35393 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC11.16□□□□□ -0.62
Efnb3O35393 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Efnb3O35393 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Efnb3O35393 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Efnb3O35393 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Efnb3O35393 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Efnb3O35393 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Efnb3O35393 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Efnb3O35393 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
Efnb3O35393 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Efnb3O35393 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Efnb3O35393 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Efnb3O35393 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Efnb3O35393 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC11.15□□□□□ -0.62
Efnb3O35393 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Efnb3O35393 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Efnb3O35393 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Efnb3O35393 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Efnb3O35393 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Efnb3O35393 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Efnb3O35393 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Efnb3O35393 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Efnb3O35393 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
Efnb3O35393 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Efnb3O35393 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Efnb3O35393 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC11.15□□□□□ -0.62
Efnb3O35393 Gm13036-201ENSMUST00000117799 748 ntBASIC11.15□□□□□ -0.62
Efnb3O35393 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Efnb3O35393 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC11.15□□□□□ -0.62
Efnb3O35393 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC11.15□□□□□ -0.62
Efnb3O35393 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC11.15□□□□□ -0.62
Efnb3O35393 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Efnb3O35393 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Efnb3O35393 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC11.15□□□□□ -0.62
Efnb3O35393 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC11.15□□□□□ -0.62
Efnb3O35393 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC11.15□□□□□ -0.62
Efnb3O35393 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Efnb3O35393 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Efnb3O35393 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Efnb3O35393 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Efnb3O35393 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Efnb3O35393 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Efnb3O35393 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Efnb3O35393 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Efnb3O35393 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Efnb3O35393 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Efnb3O35393 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Efnb3O35393 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Efnb3O35393 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Efnb3O35393 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.63
Efnb3O35393 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC11.15□□□□□ -0.63
Efnb3O35393 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Efnb3O35393 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC11.15□□□□□ -0.63
Efnb3O35393 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Efnb3O35393 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Efnb3O35393 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Efnb3O35393 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC11.15□□□□□ -0.63
Efnb3O35393 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC11.15□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms