Protein–RNA interactions for Protein: G3X8Z7

Chrna9, Cholinergic receptor, nicotinic, alpha polypeptide 9, mousemouse

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna9G3X8Z7 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Chrna9G3X8Z7 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC15.15■□□□□ 0.02
Chrna9G3X8Z7 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC15.15■□□□□ 0.02
Chrna9G3X8Z7 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Chrna9G3X8Z7 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Chrna9G3X8Z7 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Chrna9G3X8Z7 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Chrna9G3X8Z7 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Chrna9G3X8Z7 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Chrna9G3X8Z7 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Chrna9G3X8Z7 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Chrna9G3X8Z7 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC15.15■□□□□ 0.02
Chrna9G3X8Z7 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Chrna9G3X8Z7 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Chrna9G3X8Z7 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Chrna9G3X8Z7 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC15.15■□□□□ 0.02
Chrna9G3X8Z7 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Chrna9G3X8Z7 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC15.15■□□□□ 0.02
Chrna9G3X8Z7 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Chrna9G3X8Z7 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC15.15■□□□□ 0.02
Chrna9G3X8Z7 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
Chrna9G3X8Z7 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Chrna9G3X8Z7 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Chrna9G3X8Z7 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC15.15■□□□□ 0.02
Chrna9G3X8Z7 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC15.15■□□□□ 0.02
Chrna9G3X8Z7 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC15.15■□□□□ 0.02
Chrna9G3X8Z7 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Chrna9G3X8Z7 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Chrna9G3X8Z7 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC15.15■□□□□ 0.02
Chrna9G3X8Z7 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Chrna9G3X8Z7 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Chrna9G3X8Z7 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Chrna9G3X8Z7 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Chrna9G3X8Z7 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
Chrna9G3X8Z7 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Chrna9G3X8Z7 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chrna9G3X8Z7 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
Chrna9G3X8Z7 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chrna9G3X8Z7 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chrna9G3X8Z7 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Chrna9G3X8Z7 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chrna9G3X8Z7 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chrna9G3X8Z7 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chrna9G3X8Z7 Gm18027-201ENSMUST00000218947 619 ntBASIC15.14■□□□□ 0.01
Chrna9G3X8Z7 Chchd1-203ENSMUST00000224633 557 ntBASIC15.14■□□□□ 0.01
Chrna9G3X8Z7 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
Chrna9G3X8Z7 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chrna9G3X8Z7 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chrna9G3X8Z7 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC15.14■□□□□ 0.01
Chrna9G3X8Z7 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chrna9G3X8Z7 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chrna9G3X8Z7 Gm18244-201ENSMUST00000219747 1566 ntBASIC15.14■□□□□ 0.01
Chrna9G3X8Z7 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chrna9G3X8Z7 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chrna9G3X8Z7 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Chrna9G3X8Z7 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Chrna9G3X8Z7 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chrna9G3X8Z7 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chrna9G3X8Z7 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chrna9G3X8Z7 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chrna9G3X8Z7 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chrna9G3X8Z7 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC15.13■□□□□ 0.01
Chrna9G3X8Z7 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chrna9G3X8Z7 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC15.13■□□□□ 0.01
Chrna9G3X8Z7 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chrna9G3X8Z7 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chrna9G3X8Z7 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Chrna9G3X8Z7 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chrna9G3X8Z7 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chrna9G3X8Z7 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chrna9G3X8Z7 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chrna9G3X8Z7 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Chrna9G3X8Z7 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chrna9G3X8Z7 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chrna9G3X8Z7 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Chrna9G3X8Z7 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Chrna9G3X8Z7 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chrna9G3X8Z7 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC15.13■□□□□ 0.01
Chrna9G3X8Z7 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC15.13■□□□□ 0.01
Chrna9G3X8Z7 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Chrna9G3X8Z7 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC15.13■□□□□ 0.01
Chrna9G3X8Z7 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chrna9G3X8Z7 Gm37714-201ENSMUST00000194742 342 ntBASIC15.13■□□□□ 0.01
Chrna9G3X8Z7 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC15.13■□□□□ 0.01
Chrna9G3X8Z7 AC154595.3-201ENSMUST00000224579 384 ntBASIC15.13■□□□□ 0.01
Chrna9G3X8Z7 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chrna9G3X8Z7 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chrna9G3X8Z7 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chrna9G3X8Z7 Zkscan14-203ENSMUST00000198959 2243 ntBASIC15.13■□□□□ 0.01
Chrna9G3X8Z7 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Chrna9G3X8Z7 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chrna9G3X8Z7 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Chrna9G3X8Z7 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chrna9G3X8Z7 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Chrna9G3X8Z7 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chrna9G3X8Z7 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chrna9G3X8Z7 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chrna9G3X8Z7 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Chrna9G3X8Z7 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Chrna9G3X8Z7 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms