Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
NpcdF8VQB8 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NpcdF8VQB8 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NpcdF8VQB8 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NpcdF8VQB8 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NpcdF8VQB8 Gm19184-201ENSMUST00000196798 928 ntBASIC16.91■□□□□ 0.3
NpcdF8VQB8 Gm18753-201ENSMUST00000201000 566 ntBASIC16.91■□□□□ 0.3
NpcdF8VQB8 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC16.91■□□□□ 0.3
NpcdF8VQB8 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
NpcdF8VQB8 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NpcdF8VQB8 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NpcdF8VQB8 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
NpcdF8VQB8 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NpcdF8VQB8 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NpcdF8VQB8 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NpcdF8VQB8 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NpcdF8VQB8 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NpcdF8VQB8 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
NpcdF8VQB8 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC16.9■□□□□ 0.3
NpcdF8VQB8 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NpcdF8VQB8 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NpcdF8VQB8 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
NpcdF8VQB8 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
NpcdF8VQB8 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NpcdF8VQB8 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
NpcdF8VQB8 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
NpcdF8VQB8 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NpcdF8VQB8 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
NpcdF8VQB8 AC174678.1-201ENSMUST00000228007 2749 ntBASIC16.9■□□□□ 0.3
NpcdF8VQB8 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NpcdF8VQB8 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NpcdF8VQB8 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
NpcdF8VQB8 Gm43094-201ENSMUST00000196549 921 ntBASIC16.9■□□□□ 0.3
NpcdF8VQB8 Gm5276-201ENSMUST00000196683 1047 ntBASIC16.9■□□□□ 0.3
NpcdF8VQB8 Gm38671-201ENSMUST00000200573 130 ntBASIC16.9■□□□□ 0.3
NpcdF8VQB8 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC16.9■□□□□ 0.3
NpcdF8VQB8 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NpcdF8VQB8 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NpcdF8VQB8 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NpcdF8VQB8 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC16.9■□□□□ 0.3
NpcdF8VQB8 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NpcdF8VQB8 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
NpcdF8VQB8 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
NpcdF8VQB8 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NpcdF8VQB8 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
NpcdF8VQB8 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NpcdF8VQB8 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
NpcdF8VQB8 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
NpcdF8VQB8 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC16.9■□□□□ 0.3
NpcdF8VQB8 Gm12846-201ENSMUST00000120431 1373 ntBASIC16.89■□□□□ 0.3
NpcdF8VQB8 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
NpcdF8VQB8 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NpcdF8VQB8 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC16.89■□□□□ 0.29
NpcdF8VQB8 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
NpcdF8VQB8 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NpcdF8VQB8 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NpcdF8VQB8 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
NpcdF8VQB8 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NpcdF8VQB8 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NpcdF8VQB8 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NpcdF8VQB8 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC16.89■□□□□ 0.29
NpcdF8VQB8 Gm16177-201ENSMUST00000120728 718 ntBASIC16.89■□□□□ 0.29
NpcdF8VQB8 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
NpcdF8VQB8 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC16.89■□□□□ 0.29
NpcdF8VQB8 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC16.89■□□□□ 0.29
NpcdF8VQB8 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NpcdF8VQB8 Gm43068-201ENSMUST00000201095 1273 ntBASIC16.89■□□□□ 0.29
NpcdF8VQB8 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
NpcdF8VQB8 Gm24526-201ENSMUST00000082921 158 ntBASIC16.89■□□□□ 0.29
NpcdF8VQB8 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
NpcdF8VQB8 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
NpcdF8VQB8 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NpcdF8VQB8 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NpcdF8VQB8 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC16.89■□□□□ 0.29
NpcdF8VQB8 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NpcdF8VQB8 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
NpcdF8VQB8 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC16.89■□□□□ 0.29
NpcdF8VQB8 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NpcdF8VQB8 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
NpcdF8VQB8 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NpcdF8VQB8 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NpcdF8VQB8 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NpcdF8VQB8 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NpcdF8VQB8 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NpcdF8VQB8 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NpcdF8VQB8 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
NpcdF8VQB8 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
NpcdF8VQB8 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
NpcdF8VQB8 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC16.88■□□□□ 0.29
NpcdF8VQB8 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NpcdF8VQB8 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC16.88■□□□□ 0.29
NpcdF8VQB8 Mir5132-201ENSMUST00000175166 71 ntBASIC16.88■□□□□ 0.29
NpcdF8VQB8 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NpcdF8VQB8 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NpcdF8VQB8 Gm3786-201ENSMUST00000202659 378 ntBASIC16.88■□□□□ 0.29
NpcdF8VQB8 Gm6983-201ENSMUST00000214912 628 ntBASIC16.88■□□□□ 0.29
NpcdF8VQB8 AC093022.1-201ENSMUST00000226949 1072 ntBASIC16.88■□□□□ 0.29
NpcdF8VQB8 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NpcdF8VQB8 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NpcdF8VQB8 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms