Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc188F6WEU2 Mir497b-201ENSMUST00000093601 125 ntBASIC14.12□□□□□ -0.15
Ccdc188F6WEU2 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc188F6WEU2 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc188F6WEU2 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc188F6WEU2 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
Ccdc188F6WEU2 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc188F6WEU2 Gm5049-201ENSMUST00000195878 1590 ntBASIC14.12□□□□□ -0.15
Ccdc188F6WEU2 AC114543.1-201ENSMUST00000226451 1558 ntBASIC14.12□□□□□ -0.15
Ccdc188F6WEU2 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc188F6WEU2 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc188F6WEU2 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc188F6WEU2 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc188F6WEU2 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc188F6WEU2 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc188F6WEU2 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc188F6WEU2 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc188F6WEU2 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc188F6WEU2 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Ccdc188F6WEU2 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc188F6WEU2 App-207ENSMUST00000227737 2827 ntBASIC14.11□□□□□ -0.15
Ccdc188F6WEU2 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Ccdc188F6WEU2 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc188F6WEU2 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc188F6WEU2 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc188F6WEU2 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc188F6WEU2 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC14.11□□□□□ -0.15
Ccdc188F6WEU2 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Ccdc188F6WEU2 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Ccdc188F6WEU2 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc188F6WEU2 Gm11597-201ENSMUST00000121423 964 ntBASIC14.11□□□□□ -0.15
Ccdc188F6WEU2 Gm12208-201ENSMUST00000122004 163 ntBASIC14.11□□□□□ -0.15
Ccdc188F6WEU2 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC14.11□□□□□ -0.15
Ccdc188F6WEU2 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc188F6WEU2 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc188F6WEU2 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc188F6WEU2 Gm3890-201ENSMUST00000182416 207 ntBASIC14.11□□□□□ -0.15
Ccdc188F6WEU2 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC14.11□□□□□ -0.15
Ccdc188F6WEU2 Gm29608-201ENSMUST00000190444 463 ntBASIC14.11□□□□□ -0.15
Ccdc188F6WEU2 Ighv1-51-201ENSMUST00000192903 354 ntBASIC14.11□□□□□ -0.15
Ccdc188F6WEU2 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC14.11□□□□□ -0.15
Ccdc188F6WEU2 Gm44126-201ENSMUST00000204831 514 ntBASIC14.11□□□□□ -0.15
Ccdc188F6WEU2 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc188F6WEU2 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC14.11□□□□□ -0.15
Ccdc188F6WEU2 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Ccdc188F6WEU2 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc188F6WEU2 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC14.11□□□□□ -0.15
Ccdc188F6WEU2 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc188F6WEU2 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc188F6WEU2 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc188F6WEU2 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc188F6WEU2 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc188F6WEU2 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc188F6WEU2 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc188F6WEU2 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
Ccdc188F6WEU2 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
Ccdc188F6WEU2 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc188F6WEU2 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc188F6WEU2 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc188F6WEU2 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc188F6WEU2 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc188F6WEU2 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc188F6WEU2 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC14.1□□□□□ -0.15
Ccdc188F6WEU2 Mir6958-201ENSMUST00000184207 73 ntBASIC14.1□□□□□ -0.15
Ccdc188F6WEU2 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc188F6WEU2 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc188F6WEU2 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc188F6WEU2 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc188F6WEU2 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc188F6WEU2 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC14.1□□□□□ -0.15
Ccdc188F6WEU2 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc188F6WEU2 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc188F6WEU2 Gm10710-201ENSMUST00000047876 3971 ntBASIC14.1□□□□□ -0.15
Ccdc188F6WEU2 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc188F6WEU2 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc188F6WEU2 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc188F6WEU2 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc188F6WEU2 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc188F6WEU2 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccdc188F6WEU2 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Ccdc188F6WEU2 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC14.09□□□□□ -0.15
Ccdc188F6WEU2 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc188F6WEU2 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc188F6WEU2 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc188F6WEU2 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Ccdc188F6WEU2 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc188F6WEU2 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc188F6WEU2 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Ccdc188F6WEU2 Gm13047-201ENSMUST00000117116 815 ntBASIC14.09□□□□□ -0.15
Ccdc188F6WEU2 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC14.09□□□□□ -0.15
Ccdc188F6WEU2 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC14.09□□□□□ -0.15
Ccdc188F6WEU2 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC14.09□□□□□ -0.15
Ccdc188F6WEU2 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC14.09□□□□□ -0.15
Ccdc188F6WEU2 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC14.09□□□□□ -0.15
Ccdc188F6WEU2 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc188F6WEU2 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Ccdc188F6WEU2 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccdc188F6WEU2 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC14.09□□□□□ -0.15
Ccdc188F6WEU2 Gm30285-201ENSMUST00000214614 422 ntBASIC14.09□□□□□ -0.15
Ccdc188F6WEU2 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms