Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Ube4aE9Q735 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ube4aE9Q735 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Ube4aE9Q735 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ube4aE9Q735 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ube4aE9Q735 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ube4aE9Q735 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Ube4aE9Q735 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ube4aE9Q735 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Ube4aE9Q735 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ube4aE9Q735 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
Ube4aE9Q735 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Ube4aE9Q735 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Ube4aE9Q735 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ube4aE9Q735 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ube4aE9Q735 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ube4aE9Q735 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Ube4aE9Q735 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ube4aE9Q735 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Ube4aE9Q735 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ube4aE9Q735 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Ube4aE9Q735 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ube4aE9Q735 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ube4aE9Q735 Gm15371-201ENSMUST00000117057 784 ntBASIC16.86■□□□□ 0.29
Ube4aE9Q735 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Ube4aE9Q735 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ube4aE9Q735 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ube4aE9Q735 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Ube4aE9Q735 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ube4aE9Q735 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ube4aE9Q735 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ube4aE9Q735 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ube4aE9Q735 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Ube4aE9Q735 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ube4aE9Q735 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ube4aE9Q735 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Ube4aE9Q735 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Ube4aE9Q735 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ube4aE9Q735 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC16.85■□□□□ 0.29
Ube4aE9Q735 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC16.85■□□□□ 0.29
Ube4aE9Q735 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ube4aE9Q735 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ube4aE9Q735 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ube4aE9Q735 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ube4aE9Q735 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ube4aE9Q735 Mir1982-201ENSMUST00000157368 74 ntBASIC16.85■□□□□ 0.29
Ube4aE9Q735 Gm38223-201ENSMUST00000194484 695 ntBASIC16.85■□□□□ 0.29
Ube4aE9Q735 Gm5276-201ENSMUST00000196683 1047 ntBASIC16.85■□□□□ 0.29
Ube4aE9Q735 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC16.85■□□□□ 0.29
Ube4aE9Q735 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC16.85■□□□□ 0.29
Ube4aE9Q735 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ube4aE9Q735 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ube4aE9Q735 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC16.85■□□□□ 0.29
Ube4aE9Q735 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC16.85■□□□□ 0.29
Ube4aE9Q735 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ube4aE9Q735 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ube4aE9Q735 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ube4aE9Q735 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Ube4aE9Q735 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Ube4aE9Q735 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ube4aE9Q735 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ube4aE9Q735 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ube4aE9Q735 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Ube4aE9Q735 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ube4aE9Q735 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Ube4aE9Q735 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Ube4aE9Q735 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Ube4aE9Q735 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC16.85■□□□□ 0.29
Ube4aE9Q735 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ube4aE9Q735 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ube4aE9Q735 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ube4aE9Q735 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ube4aE9Q735 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ube4aE9Q735 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ube4aE9Q735 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ube4aE9Q735 Gm8652-201ENSMUST00000181363 964 ntBASIC16.84■□□□□ 0.29
Ube4aE9Q735 Gm44397-201ENSMUST00000195950 113 ntBASIC16.84■□□□□ 0.29
Ube4aE9Q735 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ube4aE9Q735 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ube4aE9Q735 Gm5161-201ENSMUST00000075243 853 ntBASIC16.84■□□□□ 0.29
Ube4aE9Q735 Gm24447-201ENSMUST00000083977 338 ntBASIC16.84■□□□□ 0.29
Ube4aE9Q735 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ube4aE9Q735 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ube4aE9Q735 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ube4aE9Q735 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ube4aE9Q735 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ube4aE9Q735 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC16.84■□□□□ 0.29
Ube4aE9Q735 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC16.84■□□□□ 0.29
Ube4aE9Q735 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
Ube4aE9Q735 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ube4aE9Q735 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ube4aE9Q735 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ube4aE9Q735 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ube4aE9Q735 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
Ube4aE9Q735 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Ube4aE9Q735 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Ube4aE9Q735 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Ube4aE9Q735 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ube4aE9Q735 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Ube4aE9Q735 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms