Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Gm3222-201ENSMUST00000071282 990 ntBASIC16.57■□□□□ 0.24
Pcdhb9E9Q5G2 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Pcdhb9E9Q5G2 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Pcdhb9E9Q5G2 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Pcdhb9E9Q5G2 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb9E9Q5G2 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb9E9Q5G2 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb9E9Q5G2 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb9E9Q5G2 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC16.56■□□□□ 0.24
Pcdhb9E9Q5G2 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb9E9Q5G2 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb9E9Q5G2 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb9E9Q5G2 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb9E9Q5G2 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Pcdhb9E9Q5G2 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb9E9Q5G2 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb9E9Q5G2 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Pcdhb9E9Q5G2 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
Pcdhb9E9Q5G2 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Pcdhb9E9Q5G2 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb9E9Q5G2 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC16.56■□□□□ 0.24
Pcdhb9E9Q5G2 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Pcdhb9E9Q5G2 Gm13385-201ENSMUST00000121089 220 ntBASIC16.56■□□□□ 0.24
Pcdhb9E9Q5G2 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
Pcdhb9E9Q5G2 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
Pcdhb9E9Q5G2 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb9E9Q5G2 Gm7063-201ENSMUST00000186840 981 ntBASIC16.56■□□□□ 0.24
Pcdhb9E9Q5G2 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb9E9Q5G2 AC135669.1-201ENSMUST00000213585 412 ntBASIC16.56■□□□□ 0.24
Pcdhb9E9Q5G2 Gm5425-201ENSMUST00000214125 459 ntBASIC16.56■□□□□ 0.24
Pcdhb9E9Q5G2 AC149294.4-201ENSMUST00000227870 882 ntBASIC16.56■□□□□ 0.24
Pcdhb9E9Q5G2 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb9E9Q5G2 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb9E9Q5G2 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb9E9Q5G2 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb9E9Q5G2 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb9E9Q5G2 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb9E9Q5G2 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb9E9Q5G2 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb9E9Q5G2 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb9E9Q5G2 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb9E9Q5G2 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb9E9Q5G2 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb9E9Q5G2 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb9E9Q5G2 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb9E9Q5G2 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb9E9Q5G2 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb9E9Q5G2 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb9E9Q5G2 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb9E9Q5G2 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb9E9Q5G2 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb9E9Q5G2 Gm12859-201ENSMUST00000117834 427 ntBASIC16.55■□□□□ 0.24
Pcdhb9E9Q5G2 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
Pcdhb9E9Q5G2 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb9E9Q5G2 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC16.55■□□□□ 0.24
Pcdhb9E9Q5G2 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Pcdhb9E9Q5G2 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb9E9Q5G2 Gm29741-201ENSMUST00000192667 421 ntBASIC16.55■□□□□ 0.24
Pcdhb9E9Q5G2 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb9E9Q5G2 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb9E9Q5G2 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb9E9Q5G2 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb9E9Q5G2 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb9E9Q5G2 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb9E9Q5G2 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb9E9Q5G2 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb9E9Q5G2 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb9E9Q5G2 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhb9E9Q5G2 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb9E9Q5G2 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb9E9Q5G2 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb9E9Q5G2 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb9E9Q5G2 Gm45760-201ENSMUST00000212190 1782 ntBASIC16.54■□□□□ 0.24
Pcdhb9E9Q5G2 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb9E9Q5G2 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC16.54■□□□□ 0.24
Pcdhb9E9Q5G2 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb9E9Q5G2 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb9E9Q5G2 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb9E9Q5G2 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Pcdhb9E9Q5G2 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb9E9Q5G2 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb9E9Q5G2 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
Pcdhb9E9Q5G2 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC16.54■□□□□ 0.24
Pcdhb9E9Q5G2 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC16.54■□□□□ 0.24
Pcdhb9E9Q5G2 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC16.54■□□□□ 0.24
Pcdhb9E9Q5G2 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC16.54■□□□□ 0.24
Pcdhb9E9Q5G2 Gm17795-201ENSMUST00000214505 757 ntBASIC16.54■□□□□ 0.24
Pcdhb9E9Q5G2 AC139580.1-202ENSMUST00000223574 928 ntBASIC16.54■□□□□ 0.24
Pcdhb9E9Q5G2 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Pcdhb9E9Q5G2 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Pcdhb9E9Q5G2 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb9E9Q5G2 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb9E9Q5G2 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
Pcdhb9E9Q5G2 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb9E9Q5G2 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb9E9Q5G2 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb9E9Q5G2 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb9E9Q5G2 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Pcdhb9E9Q5G2 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb9E9Q5G2 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms